Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 H3F3BP2-201ENST00000583907 357 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AP000769.2-201ENST00000602344 396 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL096712.1-201ENST00000614561 159 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL157762.1-201ENST00000619612 415 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AL390318.1-201ENST00000624564 687 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC008691.1-209ENST00000642094 814 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 MTND5P12-201ENST00000502851 1449 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 AC144833.1-201ENST00000567953 4089 ntBASIC5.96□□□□□ -1.46
SIX2Q9NPC8 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SIX2Q9NPC8 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 RN7SKP292-201ENST00000365522 317 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AL591135.1-201ENST00000401578 5914 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 GPS2P1-201ENST00000411761 986 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AL445665.1-202ENST00000452436 324 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 NDUFA5P5-201ENST00000468361 342 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC084033.1-201ENST00000550830 633 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AC020658.4-201ENST00000613987 684 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 MIR193BHG-214ENST00000641765 509 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 YES1P1-201ENST00000418510 1628 ntBASIC5.95□□□□□ -1.46
SIX2Q9NPC8 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
SIX2Q9NPC8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC114786.1-201ENST00000512892 1415 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 SNORA16A-201ENST00000384342 137 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 HMGN1P20-201ENST00000411849 300 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AL596448.1-201ENST00000415024 392 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AL358876.1-201ENST00000453364 1075 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC005726.4-201ENST00000582858 458 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC079315.1-201ENST00000602952 623 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC108738.1-201ENST00000603703 237 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC100767.2-201ENST00000604840 693 ntBASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIX2Q9NPC8 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms