Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNA5SP400-201ENST00000517155 111 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 WBP1LP3-201ENST00000523033 208 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC025918.2-201ENST00000558683 763 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 COX6CP7-201ENST00000597056 208 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 CYCSP1-201ENST00000604815 315 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AC096861.1-201ENST00000616652 240 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 LCOR-201ENST00000286067 4542 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 ZNF90P1-201ENST00000480493 1951 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
VTA1Q9NP79 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.91□□□□□ -1.3
VTA1Q9NP79 AL161901.1-201ENST00000624954 3425 ntBASIC6.91□□□□□ -1.3
VTA1Q9NP79 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 MIR323A-201ENST00000362199 86 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 GSTA12P-201ENST00000402398 508 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 RN7SKP199-201ENST00000410325 305 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC097721.1-201ENST00000427150 1253 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 TUBB4BP6-201ENST00000437576 479 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 GEMIN2P1-201ENST00000454246 752 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 snoU109.3-201ENST00000459477 145 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 RPSAP39-201ENST00000467439 883 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL122020.1-201ENST00000472287 459 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 SCARNA21.2-201ENST00000516600 166 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 ZNF322P1-201ENST00000568013 1209 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 NPIPB1P-202ENST00000588786 828 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 CLIC4P2-201ENST00000601934 717 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AF230666.2-201ENST00000602328 725 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC141002.1-201ENST00000607025 279 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AC109309.2-201ENST00000612597 332 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL357562.1-201ENST00000624911 609 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL109659.3-201ENST00000624985 950 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
VTA1Q9NP79 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
VTA1Q9NP79 AL645568.2-201ENST00000432815 1337 ntBASIC6.9□□□□□ -1.3
VTA1Q9NP79 PARP4P1-201ENST00000435945 2337 ntBASIC6.9□□□□□ -1.31
VTA1Q9NP79 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.9□□□□□ -1.31
VTA1Q9NP79 RBPJP7-201ENST00000442803 1447 ntBASIC6.9□□□□□ -1.31
VTA1Q9NP79 RBPJP5-201ENST00000449433 1447 ntBASIC6.9□□□□□ -1.31
VTA1Q9NP79 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.9□□□□□ -1.31
VTA1Q9NP79 AC106754.1-201ENST00000562632 1513 ntBASIC6.9□□□□□ -1.31
VTA1Q9NP79 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
VTA1Q9NP79 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.9□□□□□ -1.31
VTA1Q9NP79 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.9□□□□□ -1.31
VTA1Q9NP79 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.9□□□□□ -1.31
VTA1Q9NP79 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC010132.2-201ENST00000295493 1043 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
VTA1Q9NP79 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 RPL10P10-201ENST00000403509 664 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 RN7SKP229-201ENST00000410465 302 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 RPS3AP25-201ENST00000411660 793 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AL354890.1-201ENST00000413730 346 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 MTND4LP13-201ENST00000425022 298 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 TRBV26OR9-2-201ENST00000432077 293 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.89□□□□□ -1.31
VTA1Q9NP79 RPL6P5-201ENST00000445678 828 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 HMGN1P36-201ENST00000446623 298 ntBASIC6.89□□□□□ -1.31
VTA1Q9NP79 AL445665.1-202ENST00000452436 324 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms