Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
PCDH9Q9HC56 AL034546.1-201ENST00000623740 3693 ntBASIC5.95□□□□□ -1.46
PCDH9Q9HC56 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC027279.1-201ENST00000568885 4284 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TMSB4XP2-201ENST00000335179 210 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC066692.1-201ENST00000421721 457 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC019205.1-201ENST00000421830 730 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 OR10T1P-201ENST00000424327 947 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 RPL5P2-201ENST00000429598 854 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 DEFA9P-201ENST00000433042 285 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 NDUFS5P5-201ENST00000437256 321 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 RAD1P2-201ENST00000446414 663 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 OR7E116P-201ENST00000448529 957 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 MEMO1P4-201ENST00000453590 386 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TAAR4P-201ENST00000454843 1039 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 GOLGA5P1-201ENST00000507317 980 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TRIM77BP-201ENST00000524985 1119 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 PCNAP4-201ENST00000532690 730 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC234775.3-201ENST00000564612 656 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AL138895.2-201ENST00000603019 178 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC067773.1-201ENST00000603284 1094 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC005229.3-201ENST00000603438 323 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AC003001.2-201ENST00000616294 831 ntBASIC5.94□□□□□ -1.46
PCDH9Q9HC56 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
PCDH9Q9HC56 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AL136116.2-201ENST00000404020 785 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 USP9YP19-201ENST00000412165 485 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 ACA64.1-201ENST00000459171 127 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AP002371.1-201ENST00000463604 433 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 RPS7P6-201ENST00000485777 579 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 RN7SL57P-201ENST00000493687 290 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 GAPDHP71-201ENST00000511530 1003 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC060775.1-201ENST00000518241 520 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC006530.1-201ENST00000555980 571 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.93□□□□□ -1.46
PCDH9Q9HC56 SNORA35B-201ENST00000607417 129 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC073575.2-201ENST00000614212 627 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 AC020923.1-201ENST00000624021 917 ntBASIC5.93□□□□□ -1.46
PCDH9Q9HC56 MTCO1P1-201ENST00000624263 1081 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms