Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL353796.1-201ENST00000561542 3241 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RNA5SP77-201ENST00000365394 120 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RNU6-1263P-201ENST00000384601 106 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 PRELID1P1-201ENST00000403549 660 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL139805.1-201ENST00000407837 289 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RPS4XP5-201ENST00000419038 768 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SETP10-201ENST00000424368 814 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RPSAP65-201ENST00000429660 595 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 UBE2V2P1-201ENST00000434717 398 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC023141.8-201ENST00000442554 208 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MTCO3P17-201ENST00000443775 513 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 TRIM60P16-201ENST00000444048 694 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC002553.3-201ENST00000453002 341 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC004129.2-201ENST00000457229 287 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MTCYBP14-201ENST00000457471 715 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SNORD125-201ENST00000459538 96 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AP003385.3-201ENST00000472498 287 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 OR7E22P-201ENST00000478335 1035 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 OR9N1P-201ENST00000491296 333 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 RNA5SP75-201ENST00000516841 111 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC011270.1-201ENST00000558606 583 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC005632.2-201ENST00000564271 828 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 TXNP4-201ENST00000575018 310 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC027796.1-201ENST00000575593 512 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SNORD39.2-201ENST00000579995 76 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL512430.4-201ENST00000603085 613 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL139124.1-201ENST00000609123 421 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC008833.1-201ENST00000611633 691 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL122023.1-201ENST00000622847 530 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC087821.1-201ENST00000623639 567 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL357562.1-201ENST00000624911 609 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC073488.3-201ENST00000631611 778 ntBASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 FGG-205ENST00000407946 1636 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ALB-220ENST00000621628 1606 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SND1-IT1Q9HBX3 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC027228.2-201ENST00000567141 2154 ntBASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SND1-IT1Q9HBX3 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms