Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 SNORD94-201ENST00000386037 137 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 EI24P3-201ENST00000399046 1062 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AL117344.1-201ENST00000407196 616 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 MIR1271-201ENST00000408537 86 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 NFU1P1-201ENST00000413128 774 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 NPM1P48-201ENST00000436002 853 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 RN7SL39P-201ENST00000462264 297 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 RN7SL269P-201ENST00000467795 305 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC091917.2-201ENST00000505002 744 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 RNA5SP75-201ENST00000516841 111 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC103855.4-201ENST00000533158 265 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AP005136.2-201ENST00000583253 1049 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC241377.1-201ENST00000619797 406 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AL121985.3-201ENST00000620690 523 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC093849.1-201ENST00000563631 2209 ntBASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
VIPAS39Q9H9C1 AC003973.3-201ENST00000624863 2822 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 SMG1P7-201ENST00000565246 2704 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC009220.2-201ENST00000489759 1751 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 OR4G1P-202ENST00000641173 1788 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 RNA5SP485-201ENST00000365053 119 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC016739.1-201ENST00000405359 345 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 RNA5SP155-201ENST00000411154 129 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL139135.1-201ENST00000412675 209 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 KCTD9P1-201ENST00000430462 1167 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL592114.2-201ENST00000440142 532 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 RN7SL83P-201ENST00000468131 297 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC090638.1-201ENST00000498296 909 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 OR1E3-201ENST00000575608 948 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 MIR4433B-201ENST00000581329 102 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC036176.3-201ENST00000602456 418 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC023206.1-201ENST00000605824 298 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AP005212.4-201ENST00000614206 710 ntBASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
VIPAS39Q9H9C1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 TET1P1-201ENST00000426627 2301 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 SETP15-201ENST00000412724 337 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AL358876.1-201ENST00000453364 1075 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC099521.1-201ENST00000482557 334 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 RN7SL570P-201ENST00000484405 292 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC073610.1-201ENST00000489971 396 ntBASIC5.69□□□□□ -1.5
VIPAS39Q9H9C1 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms