Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RSPO3Q9BXY4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC027279.1-201ENST00000568885 4284 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 SUGT1P2-201ENST00000379452 992 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC004386.1-201ENST00000393214 761 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RN7SKP206-201ENST00000410823 293 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 HMGB3P24-201ENST00000433260 622 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 MEMO1P4-201ENST00000453590 386 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RN7SL214P-201ENST00000487317 265 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RPL7P51-201ENST00000490532 749 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 OR4A17P-201ENST00000526032 904 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AP000619.2-201ENST00000546014 969 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC015802.2-201ENST00000589690 189 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AC025574.2-201ENST00000615621 514 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AL162574.1-201ENST00000615702 950 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 FO681491.1-202ENST00000623392 737 ntBASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RSPO3Q9BXY4 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 SRRM1P3-201ENST00000426911 2678 ntBASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 AC120036.2-201ENST00000509729 1474 ntBASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RSPO3Q9BXY4 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 RNA5SP131-201ENST00000365452 119 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 U3.28-201ENST00000391249 210 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 OR7E101P-201ENST00000400428 513 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC006335.2-201ENST00000437993 330 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 PPIAP20-201ENST00000449839 135 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 TAAR4P-201ENST00000454843 1039 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 RN7SL583P-201ENST00000475692 287 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 RPS3AP15-201ENST00000483874 781 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC006499.4-201ENST00000510947 694 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 OR5AM1P-201ENST00000532136 1032 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 OR11H3P-201ENST00000554547 982 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC012146.2-201ENST00000576545 416 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 MIR4311-201ENST00000580794 100 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 COX6CP7-201ENST00000597056 208 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AL138895.2-201ENST00000603019 178 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AL139124.1-201ENST00000609123 421 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 RN7SL544P-201ENST00000617232 284 ntBASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.15□□□□□ -1.59
RSPO3Q9BXY4 RN7SL763P-201ENST00000620922 284 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms