Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RPL5P25-201ENST00000441148 775 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 UBE2V2P4-201ENST00000447495 259 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 RPS23P9-201ENST00000448848 438 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 NPM1P28-201ENST00000492269 840 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC091078.2-201ENST00000557145 559 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC092121.1-201ENST00000569452 202 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC023389.2-201ENST00000580031 955 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 COX6CP7-201ENST00000597056 208 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC002069.2-201ENST00000603580 883 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AL049840.6-201ENST00000604583 345 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AL353729.2-201ENST00000605859 1249 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC129915.3-201ENST00000634128 948 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC005261.6-201ENST00000623072 1387 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC139426.3-201ENST00000605648 2059 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AP001029.2-203ENST00000589795 4910 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 OR4G1P-202ENST00000641173 1788 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 RN7SKP145-201ENST00000363291 303 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 RN7SKP29-201ENST00000410957 272 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 HMGN1P20-201ENST00000411849 300 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 RPS10P18-201ENST00000442662 495 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 MEMO1P4-201ENST00000453590 386 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC006499.4-201ENST00000510947 694 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 DPPA3P2-202ENST00000557188 1219 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC090888.3-201ENST00000558917 509 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC090286.3-201ENST00000573133 187 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 AL365181.4-201ENST00000609800 547 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AL359742.1-201ENST00000622497 540 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
COL21A1Q96P44 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL21A1Q96P44 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
COL21A1Q96P44 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL21A1Q96P44 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
COL21A1Q96P44 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms