Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VPS50Q96JG6 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.06□□□□□ -1.44
VPS50Q96JG6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AP005432.1-201ENST00000580891 3485 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 RNU6-609P-201ENST00000365459 107 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 RAB9AP4-201ENST00000415230 609 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC092570.3-201ENST00000420113 693 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC011242.1-201ENST00000433596 1158 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL138899.2-201ENST00000439139 499 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 SUMO2P1-206ENST00000445436 284 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 HMGB1P7-201ENST00000450921 612 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC009963.3-201ENST00000458090 486 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC093663.2-201ENST00000484625 313 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 KHDC1P1-201ENST00000511053 508 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC106800.3-201ENST00000511389 308 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 MAST4-IT1-201ENST00000514241 658 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 RNA5SP418-201ENST00000515951 117 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 RNA5SP441-201ENST00000516809 88 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 SNORA76.2-201ENST00000517095 137 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC084121.1-201ENST00000533882 835 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC008055.1-201ENST00000547032 609 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AL121579.2-201ENST00000555466 590 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 MTATP6P2-201ENST00000603319 678 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 MIR6721-201ENST00000617181 87 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 AC091046.2-201ENST00000620775 665 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.05□□□□□ -1.44
VPS50Q96JG6 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
VPS50Q96JG6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
VPS50Q96JG6 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 CR382285.2-201ENST00000624662 1495 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
VPS50Q96JG6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
VPS50Q96JG6 RPL11P4-201ENST00000332269 436 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 RNA5SP77-201ENST00000365394 120 ntBASIC6.04□□□□□ -1.44
VPS50Q96JG6 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms