Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 DHFRP1-201ENST00000579682 559 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 MIR4311-201ENST00000580794 100 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AC060780.2-201ENST00000589047 198 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 AL162456.1-201ENST00000634535 2006 ntBASIC5.69□□□□□ -1.5
ECHDC3Q96DC8 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC114786.1-201ENST00000512892 1415 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 RN7SKP269-201ENST00000365545 319 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 GAPDHP42-201ENST00000406848 981 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 RMRPP5-201ENST00000411156 267 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 RPS6P23-201ENST00000413224 722 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 RNF10P1-201ENST00000418589 369 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 FMO7P-201ENST00000436045 768 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AL450996.1-201ENST00000445574 1202 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AL450023.1-201ENST00000450868 751 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 RN7SL174P-201ENST00000475578 289 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AL049872.1-201ENST00000556323 322 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 MIR1273E-201ENST00000581165 102 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 MIR4420-201ENST00000583944 77 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC011445.2-201ENST00000599274 173 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AP001267.4-201ENST00000602598 545 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 FO393422.1-201ENST00000603908 708 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC008115.3-201ENST00000614874 549 ntBASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.68□□□□□ -1.5
ECHDC3Q96DC8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 GAPDHP24-201ENST00000328713 983 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 RNA5SP242-201ENST00000364171 118 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC242426.1-201ENST00000435270 960 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 YWHAEP1-201ENST00000453697 763 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 LDHBP2-201ENST00000456969 1005 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC093719.1-201ENST00000480427 441 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 ST13P12-201ENST00000508958 1094 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC109481.1-201ENST00000509173 282 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC021146.10-201ENST00000515628 706 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 AC104695.2-201ENST00000605056 775 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 PPATP2-201ENST00000605635 508 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 MIR4302-201ENST00000638058 60 ntBASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ECHDC3Q96DC8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms