Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL731566.2-201ENST00000618971 317 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 AC087565.3-203ENST00000641018 837 ntBASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHROOM3Q8TF72 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AL606490.1-201ENST00000452266 765 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AP000547.1-201ENST00000454360 617 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC023245.1-201ENST00000468501 517 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC087672.1-201ENST00000479876 766 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 RN7SL570P-201ENST00000484405 292 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 MIR2117-201ENST00000516780 80 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 SCARNA6.1-201ENST00000516989 238 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 CDC42P3-201ENST00000518493 633 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC004825.1-201ENST00000555068 586 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 DHFRP1-201ENST00000579682 559 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 NANOGP3-201ENST00000605855 286 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC015712.7-201ENST00000615211 635 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 C4BPAP1-201ENST00000415474 1893 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 WDR95P-201ENST00000425638 1542 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AL133445.1-201ENST00000467051 452 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC079080.1-201ENST00000479841 822 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 RN7SL727P-201ENST00000482164 296 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AL671862.1-201ENST00000515851 349 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 RN7SKP253-201ENST00000516424 309 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 AL445670.1-201ENST00000618889 801 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 PABPC1P6-201ENST00000445594 1829 ntBASIC5.8□□□□□ -1.48
SHROOM3Q8TF72 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC114786.1-201ENST00000512892 1415 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC114774.1-201ENST00000507410 1770 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 RN7SKP125-201ENST00000410481 302 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC011225.1-201ENST00000457751 369 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 BX510359.5-201ENST00000515651 304 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 HIRAP1-201ENST00000605318 787 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC087516.1-201ENST00000561236 2428 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC068870.1-201ENST00000563737 2455 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC027279.1-201ENST00000568885 4284 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 SRRM1P3-201ENST00000426911 2678 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 AC007159.1-201ENST00000566529 4706 ntBASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHROOM3Q8TF72 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 GSTA7P-201ENST00000438425 448 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 LINC02019-201ENST00000608605 2060 ntBASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHROOM3Q8TF72 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms