Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 MIR4330-201ENST00000579077 105 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC006115.2-201ENST00000596823 202 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 RNU4-4P-201ENST00000364588 130 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 OR4K12P-201ENST00000406538 961 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AL360081.1-201ENST00000428299 555 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AZGP1P2-201ENST00000454506 345 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 RPS3AP41-201ENST00000462701 778 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC093890.1-201ENST00000502554 540 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 GSTP1P1-201ENST00000548078 319 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 CR383656.6-201ENST00000550518 394 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC007346.2-201ENST00000564816 892 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 MIR4480-201ENST00000582492 71 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 AL049840.6-202ENST00000603373 279 ntBASIC6.76□□□□□ -1.33
SNED1Q8TER0 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SNED1Q8TER0 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SNED1Q8TER0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC022164.1-201ENST00000568767 2673 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 ZNF840P-201ENST00000504759 1996 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 SNORA17.1-201ENST00000362945 126 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 RN7SKP6-201ENST00000364795 319 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 MIR551A-201ENST00000385042 96 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 RNU1-149P-201ENST00000390870 161 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 AL133388.1-201ENST00000404509 287 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AL365220.1-201ENST00000432923 399 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 USP24P1-201ENST00000433802 779 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 RPS3AP38-201ENST00000435889 763 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 RNU1-88P-201ENST00000459274 128 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 HMGB1P40-201ENST00000525121 540 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.75□□□□□ -1.33
SNED1Q8TER0 AC068769.1-201ENST00000474767 2426 ntBASIC6.75□□□□□ -1.33
SNED1Q8TER0 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SNED1Q8TER0 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AL034546.1-201ENST00000623740 3693 ntBASIC6.74□□□□□ -1.33
SNED1Q8TER0 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
SNED1Q8TER0 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.74□□□□□ -1.33
SNED1Q8TER0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms