Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 MIR6780B-201ENST00000610307 79 ntBASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 AC073592.6-201ENST00000624271 415 ntBASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 PDZK1P1-202ENST00000425209 1350 ntBASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ZNF439Q8NDP4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 RNA5SP477-201ENST00000362639 119 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 RNU1-136P-201ENST00000384181 164 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AL357752.1-201ENST00000412817 349 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 RNGTTP1-201ENST00000420965 728 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC025458.1-201ENST00000506046 166 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 Y_RNA.667-201ENST00000516212 107 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 RNA5SP438-201ENST00000516561 112 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC011853.1-201ENST00000518911 454 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 IGLV3-30-201ENST00000524362 298 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC027369.2-201ENST00000528030 440 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AP000648.1-201ENST00000529682 397 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC006363.1-201ENST00000603806 463 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AL031601.1-201ENST00000605702 394 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AL035661.1-201ENST00000620459 1144 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC022919.1-201ENST00000624979 626 ntBASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ZNF439Q8NDP4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
ZNF439Q8NDP4 MUC2-202ENST00000613187 4845 ntBASIC4.71□□□□□ -1.65
ZNF439Q8NDP4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ZNF439Q8NDP4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.65
ZNF439Q8NDP4 AC004076.2-201ENST00000620532 3323 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 RN7SKP81-201ENST00000365603 331 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 SNORA5.1-201ENST00000384275 131 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 MIR130A-201ENST00000385274 89 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 EI24P3-201ENST00000399046 1062 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 MRPL53P1-201ENST00000414323 319 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC069154.1-201ENST00000432914 542 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 RPS17P15-201ENST00000475609 349 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AP002884.1-201ENST00000479691 655 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC091544.1-201ENST00000484702 348 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC074255.1-201ENST00000511259 501 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 OR5H7P-201ENST00000514084 930 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC139365.2-201ENST00000517972 253 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 HMGN2P36-201ENST00000529541 409 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC096996.1-201ENST00000563813 325 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC007342.5-201ENST00000571340 2142 ntBASIC4.71□□□□□ -1.66
ZNF439Q8NDP4 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms