Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNA5SP34-201ENST00000516887 130 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AC008115.4-201ENST00000619780 775 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 MAPK10-270ENST00000641102 3538 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AL133388.1-201ENST00000404509 287 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 MIR1286-201ENST00000408112 78 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 MARK2P12-201ENST00000420129 585 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC084824.2-201ENST00000548906 345 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC025857.2-201ENST00000602711 238 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AL512329.2-201ENST00000607350 548 ntBASIC8.56□□□□□ -1.04
VPS8Q8N3P4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
VPS8Q8N3P4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 DPPA2P3-201ENST00000411853 655 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 LYPLA1P1-201ENST00000434514 622 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 GSTM5P1-201ENST00000434751 660 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 OR52B5P-201ENST00000435337 951 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 FAR2P1-206ENST00000449736 709 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 BX284632.1-201ENST00000478218 541 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 RPS4XP14-201ENST00000493072 781 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AC109464.1-201ENST00000511091 819 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 OR4A46P-201ENST00000527255 933 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AP004607.2-201ENST00000533949 322 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AC106730.2-201ENST00000566641 540 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 MIR6837-201ENST00000620884 64 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 MTCO1P1-201ENST00000624263 1081 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 OR52B5P-202ENST00000641118 1110 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AL592429.1-201ENST00000403909 1473 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 AC079097.1-201ENST00000512187 1399 ntBASIC8.55□□□□□ -1.04
VPS8Q8N3P4 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.55□□□□□ -1.04
VPS8Q8N3P4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 RPL12P17-201ENST00000432393 498 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 RPS4XP1-201ENST00000482189 787 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC015864.1-201ENST00000496512 544 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 HMGB1P40-201ENST00000525121 540 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 OR8Q1P-201ENST00000526467 655 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 OR4A43P-201ENST00000532938 908 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 HNRNPCP1-201ENST00000556181 766 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC018445.2-201ENST00000622987 260 ntBASIC8.54□□□□□ -1.04
VPS8Q8N3P4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC8.54□□□□□ -1.04
VPS8Q8N3P4 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms