Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC100832.1-201ENST00000471945 383 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 OARD1-211ENST00000480585 829 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 RPS4XP1-201ENST00000482189 787 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC024558.1-201ENST00000505008 528 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 HIGD1AP14-201ENST00000507617 282 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 ASB8-202ENST00000535055 657 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AL445222.1-201ENST00000607259 628 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 AL512329.2-201ENST00000607350 548 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 AC004836.1-201ENST00000623032 634 ntBASIC7.19□□□□□ -1.26
SYNE4Q8N205 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE4Q8N205 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE4Q8N205 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE4Q8N205 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SYNE4Q8N205 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
SYNE4Q8N205 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL161756.3-201ENST00000641216 2071 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC009804.1-201ENST00000400949 179 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 NIFKP3-201ENST00000417799 865 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL133173.1-201ENST00000423458 397 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC092017.2-201ENST00000427600 362 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL117351.1-201ENST00000438864 766 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AL450023.1-201ENST00000450868 751 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 FCF1P7-201ENST00000451185 558 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 RPS3AP15-201ENST00000483874 781 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC004453.1-201ENST00000487895 408 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 DCN-210ENST00000547568 823 ntTSL 3 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC015720.2-201ENST00000567709 334 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 MIR4260-201ENST00000583107 67 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 SUGT1P3-202ENST00000604259 383 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 AC010245.2-201ENST00000606908 1167 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 MIR6837-201ENST00000620884 64 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 MIR8080-201ENST00000622224 89 ntBASIC7.18□□□□□ -1.26
SYNE4Q8N205 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
SYNE4Q8N205 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
SYNE4Q8N205 MIPEPP2-201ENST00000422560 1819 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 ZNF840P-201ENST00000504759 1996 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL161912.4-201ENST00000623889 2468 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 MFSD8-239ENST00000641590 2479 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SYNE4Q8N205 MIR223-201ENST00000385204 110 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC005042.1-201ENST00000393397 800 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 SNORA81-201ENST00000408493 178 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 ZNF92P1Y-201ENST00000415010 1191 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC113412.1-201ENST00000425840 504 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 UBE2V2P1-201ENST00000434717 398 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC015983.1-201ENST00000441577 373 ntBASIC7.17□□□□□ -1.26
SYNE4Q8N205 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms