Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ATP5A1P7-201ENST00000453978 1279 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC011979.1-201ENST00000472300 483 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 UBTFL6-201ENST00000477929 1024 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 SUMO2P17-201ENST00000504438 285 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC008496.1-201ENST00000509131 295 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 SCARNA20.1-201ENST00000516009 138 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 RBMS2P1-201ENST00000525031 1226 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MIR4800-201ENST00000537353 80 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 RPL41P2-201ENST00000544920 409 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 CBX3P5-201ENST00000552017 521 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MT1B-202ENST00000562399 351 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 BNIP3P10-201ENST00000605360 577 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MIR7844-201ENST00000616161 122 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 HTR1DP1-201ENST00000616500 888 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 ERBB3-213ENST00000549832 3289 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 OR2T11-202ENST00000641193 3770 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 RERE-203ENST00000400907 2973 ntTSL 5 BASIC7.74□□□□□ -1.17
NPAS3Q8IXF0 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 RNU2-39P-201ENST00000410604 198 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 USP9YP27-201ENST00000418455 438 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 OR1AA1P-201ENST00000419597 916 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AP000431.1-201ENST00000424219 469 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 RPL21P43-201ENST00000425440 472 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AKR1B10P1-201ENST00000425765 942 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 ATP5F1P1-201ENST00000433775 569 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC244505.2-201ENST00000435089 759 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL161626.1-201ENST00000441480 490 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC079781.1-201ENST00000441505 394 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 SEPT14P24-201ENST00000447236 180 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 RPL21P134-201ENST00000453468 483 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 DEFB109A-201ENST00000482450 265 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC108688.1-201ENST00000485817 713 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC019235.1-201ENST00000503847 207 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 OR7E163P-201ENST00000505943 894 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 RN7SKP2-201ENST00000517003 319 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 IGHVII-51-2-201ENST00000519778 259 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC105275.2-201ENST00000567907 711 ntBASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC015853.3-201ENST00000570974 478 ntTSL 4 BASIC7.73□□□□□ -1.17
NPAS3Q8IXF0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms