Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
LRRC28Q86X40 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
LRRC28Q86X40 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
LRRC28Q86X40 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LRRC28Q86X40 AL603750.1-201ENST00000624216 1717 ntBASIC5.09□□□□□ -1.6
LRRC28Q86X40 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.6
LRRC28Q86X40 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 RBPJP7-201ENST00000442803 1447 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 RBPJP5-201ENST00000449433 1447 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 NACAP7-201ENST00000407371 609 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AL359839.1-201ENST00000451975 1160 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC094085.1-201ENST00000468914 584 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC083795.1-201ENST00000491760 320 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC021146.10-201ENST00000515628 706 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 RNA5SP340-201ENST00000517132 107 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AL357562.1-201ENST00000624911 609 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LRRC28Q86X40 GNL2P1-201ENST00000451274 2190 ntBASIC5.08□□□□□ -1.6
LRRC28Q86X40 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.08□□□□□ -1.6
LRRC28Q86X40 MTCO1P7-201ENST00000419523 1542 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 MFSD8-239ENST00000641590 2479 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AL031595.2-201ENST00000624215 19071 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC092681.1-201ENST00000297369 291 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 RPS14P4-201ENST00000415880 418 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 KCTD9P1-201ENST00000430462 1167 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 RPL12P11-201ENST00000439970 501 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC092106.1-201ENST00000444291 373 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 LINC02210-201ENST00000444561 288 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC016027.4-201ENST00000450866 277 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.07□□□□□ -1.6
LRRC28Q86X40 SEPT10P1-201ENST00000517342 1162 ntBASIC5.07□□□□□ -1.6
LRRC28Q86X40 FTH1P11-201ENST00000517577 551 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms