Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 HSD3BP3-201ENST00000514706 994 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 UBE2NP1-201ENST00000545592 458 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 MIR4789-201ENST00000577469 82 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 MIR3135A-201ENST00000578460 77 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AC020914.7-201ENST00000594477 545 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AC114477.1-201ENST00000605097 605 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL159169.2-201ENST00000610061 1269 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL139418.1-201ENST00000613613 177 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 uc_338.31-201ENST00000615595 186 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 GLYATL2-201ENST00000287275 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
RC3H1Q5TC82 AL137100.1-201ENST00000556703 1620 ntBASIC8.76□□□□□ -1.01
RC3H1Q5TC82 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 TMCC1P1-201ENST00000518897 1980 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 TRIM51HP-202ENST00000530412 1823 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL080317.3-201ENST00000607434 4315 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 LPAR1-202ENST00000374430 2993 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL356317.1-201ENST00000396110 1436 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 RPL12P43-201ENST00000420608 499 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 FABP7P1-201ENST00000424004 391 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 MOB1AP1-201ENST00000430903 535 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 GTF3AP5-201ENST00000442645 697 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SNRPBP1-201ENST00000443634 282 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 RPL23AP28-201ENST00000448062 470 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC037198.2-201ENST00000478845 733 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 NDUFA5P12-201ENST00000503796 343 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC112484.3-201ENST00000505910 329 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC093770.1-201ENST00000511559 571 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC093664.1-201ENST00000511779 289 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 RNA5SP287-201ENST00000516358 103 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SEPT10P1-201ENST00000517342 1162 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 OR4A1P-201ENST00000532342 920 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC012435.1-202ENST00000568772 240 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC090286.3-201ENST00000573133 187 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC027243.2-201ENST00000602530 724 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AL035410.2-201ENST00000604963 864 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC004908.1-201ENST00000606572 541 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 AC011472.4-201ENST00000615848 491 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 MTND5P42-201ENST00000637720 498 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 FGG-205ENST00000407946 1636 ntTSL 5 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 MAPK10-371ENST00000641952 5209 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 FPR3-201ENST00000339223 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SALL1P1-201ENST00000438101 3837 ntBASIC8.75□□□□□ -1.01
RC3H1Q5TC82 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
RC3H1Q5TC82 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
RC3H1Q5TC82 MED6-212ENST00000615788 1700 ntTSL 5 BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms