Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
USP41Q3LFD5 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP41Q3LFD5 AC006600.2-201ENST00000624834 2506 ntBASIC6.23□□□□□ -1.41
USP41Q3LFD5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 RPL23AP17-201ENST00000401064 499 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP41Q3LFD5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC013268.2-201ENST00000420753 337 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 LYPLA1P1-201ENST00000434514 622 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC005297.1-201ENST00000444765 862 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 RAD1P2-201ENST00000446414 663 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL162739.1-201ENST00000450606 307 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC026348.1-201ENST00000462549 1053 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 CR383656.1-201ENST00000484916 377 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC027308.1-201ENST00000517993 110 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 IGKV2-18-201ENST00000522607 343 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC130364.2-201ENST00000528639 604 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL049872.1-201ENST00000556323 322 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 DPPA2P4-201ENST00000563717 878 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC012467.1-201ENST00000607740 256 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 AC007683.2-201ENST00000624681 714 ntBASIC6.22□□□□□ -1.41
USP41Q3LFD5 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USP41Q3LFD5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.21□□□□□ -1.41
USP41Q3LFD5 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
USP41Q3LFD5 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
USP41Q3LFD5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC140134.1-201ENST00000511830 3544 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL391422.1-201ENST00000402155 436 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL596448.1-201ENST00000415024 392 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 TNPO1P1-201ENST00000423641 1138 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 FRG2FP-204ENST00000453982 852 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL157777.1-201ENST00000468100 304 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC090589.1-201ENST00000473109 362 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 DUTP7-201ENST00000507982 486 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 SNRPGP1-201ENST00000553864 222 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC013244.1-201ENST00000604279 193 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AL713998.2-201ENST00000604538 1198 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC004890.3-201ENST00000605566 1095 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC008115.3-201ENST00000614874 549 ntBASIC6.21□□□□□ -1.42
USP41Q3LFD5 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USP41Q3LFD5 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP41Q3LFD5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.2□□□□□ -1.42
USP41Q3LFD5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms