Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AL078601.3-201ENST00000573303 535 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 DHFRP1-201ENST00000579682 559 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AC068768.2-201ENST00000602352 343 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC244517.3-201ENST00000616254 1235 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 AC026367.3-201ENST00000619032 590 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 MIR6813-201ENST00000621638 56 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC003985.2-201ENST00000562268 1669 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 MFSD8-219ENST00000641228 2559 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 AC116158.1-201ENST00000560231 2129 ntBASIC5.26□□□□□ -1.57
RFX4Q33E94 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RFX4Q33E94 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
RFX4Q33E94 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.26□□□□□ -1.57
RFX4Q33E94 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFX4Q33E94 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFX4Q33E94 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RFX4Q33E94 RNA5SP241-201ENST00000391326 114 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 HMGB1P7-201ENST00000450921 612 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AC073476.1-201ENST00000452854 407 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 RN7SL254P-201ENST00000460609 284 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AL157777.1-201ENST00000468100 304 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AC044810.1-201ENST00000480271 711 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AC069304.1-201ENST00000491593 704 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 IGLV3-24-201ENST00000517477 197 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.25□□□□□ -1.57
RFX4Q33E94 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AC092332.1-201ENST00000563684 829 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 MIR744-201ENST00000578242 98 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 ARGFXP2-201ENST00000579304 949 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.25□□□□□ -1.57
RFX4Q33E94 AC006363.1-201ENST00000603806 463 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 uc_338.7-201ENST00000621834 124 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 FRG1EP-201ENST00000634469 770 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AL357140.4-201ENST00000636827 412 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 NR1H5P-201ENST00000452683 1377 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 AL603750.1-201ENST00000624216 1717 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 AC104964.3-201ENST00000606115 2860 ntBASIC5.25□□□□□ -1.57
RFX4Q33E94 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.25□□□□□ -1.57
RFX4Q33E94 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFX4Q33E94 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 AC112198.2-201ENST00000426589 6996 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 OR4G1P-202ENST00000641173 1788 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.24□□□□□ -1.57
RFX4Q33E94 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
RFX4Q33E94 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX4Q33E94 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX4Q33E94 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX4Q33E94 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 RN7SKP250-201ENST00000363924 321 ntBASIC5.24□□□□□ -1.57
RFX4Q33E94 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
RFX4Q33E94 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
RFX4Q33E94 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms