Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 AP001541.1-201ENST00000623322 1904 ntBASIC6.36□□□□□ -1.39
UBE3AQ05086 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC6.36□□□□□ -1.39
UBE3AQ05086 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
UBE3AQ05086 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.36□□□□□ -1.39
UBE3AQ05086 CDY5P-201ENST00000411487 1580 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 CDY9P-201ENST00000451397 1580 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.35□□□□□ -1.39
UBE3AQ05086 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 PARP4P2-201ENST00000446672 3326 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 OR10R3P-201ENST00000361688 942 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 MIR937-201ENST00000401271 86 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 USP9YP19-201ENST00000412165 485 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.35□□□□□ -1.39
UBE3AQ05086 ZFAND6P1-201ENST00000434138 605 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 MRPS33P4-201ENST00000434892 317 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 ARL5AP3-201ENST00000439327 386 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AL133445.1-201ENST00000467051 452 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 RN7SL799P-201ENST00000475891 298 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 FTH1P8-201ENST00000498161 514 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 OR4V1P-201ENST00000525394 1140 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AC074029.2-201ENST00000551045 634 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 MIR4301-201ENST00000577203 66 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 BNIP3P32-201ENST00000600015 554 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AL139099.4-201ENST00000614802 114 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AL445670.1-201ENST00000618889 801 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AC007683.2-201ENST00000624681 714 ntBASIC6.35□□□□□ -1.39
UBE3AQ05086 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
UBE3AQ05086 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
UBE3AQ05086 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
UBE3AQ05086 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
UBE3AQ05086 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
UBE3AQ05086 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
UBE3AQ05086 HDAC1P2-201ENST00000453661 1398 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
UBE3AQ05086 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
UBE3AQ05086 AC005618.1-201ENST00000606901 3148 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 RNA5SP333-201ENST00000363466 118 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 RN7SKP124-201ENST00000364730 341 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 RNA5SP334-201ENST00000364825 118 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
UBE3AQ05086 AMZ2P2-201ENST00000406819 1057 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 AL596448.1-201ENST00000415024 392 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 MTND2P11-201ENST00000423638 648 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 AL022331.1-201ENST00000429025 477 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 MTCO1P45-201ENST00000431457 267 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.34□□□□□ -1.39
UBE3AQ05086 MTCO3P43-201ENST00000440974 771 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 RPS7P3-201ENST00000443360 580 ntBASIC6.34□□□□□ -1.39
UBE3AQ05086 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.34□□□□□ -1.39
UBE3AQ05086 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.34□□□□□ -1.39
UBE3AQ05086 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
UBE3AQ05086 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms