Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.9□□□□□ -1.63
CX3CL1P78423 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CX3CL1P78423 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CX3CL1P78423 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CX3CL1P78423 AC011416.1-201ENST00000514947 1732 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 CASC19-260ENST00000641828 2001 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CX3CL1P78423 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 RNU6-1263P-201ENST00000384601 106 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CX3CL1P78423 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 NPM1P37-201ENST00000403105 874 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CL1P78423 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC093084.1-201ENST00000424233 687 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 MRPS21P2-201ENST00000424704 264 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 RPL5P2-201ENST00000429598 854 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 PSMD10P2-201ENST00000432890 672 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 MTCYBP29-201ENST00000436327 1006 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 OR3D1P-201ENST00000438288 955 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AL353898.1-201ENST00000444055 238 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AL590004.3-202ENST00000445883 451 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC112187.1-201ENST00000455837 479 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 RPL5P13-201ENST00000462840 709 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 RPL9P15-201ENST00000491096 532 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AP002453.1-201ENST00000492327 668 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC106822.1-201ENST00000502647 526 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 RNA5SP441-201ENST00000516809 88 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC093014.1-201ENST00000548926 724 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC122134.1-202ENST00000569111 1201 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AL078601.3-201ENST00000573303 535 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CL1P78423 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AP002884.5-201ENST00000595053 1132 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC025857.2-201ENST00000602711 238 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC008555.7-201ENST00000605008 583 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC015849.2-201ENST00000605738 409 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC245389.2-201ENST00000616023 576 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 RNA5SP439-201ENST00000617595 124 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC242843.1-201ENST00000618702 573 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 AC069234.4-201ENST00000621276 412 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CX3CL1P78423 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC024587.1-201ENST00000505925 2157 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 KYNUP3-201ENST00000574386 1341 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 CDC27P2-201ENST00000425026 1922 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 AC140479.2-201ENST00000421567 3130 ntBASIC4.89□□□□□ -1.63
CX3CL1P78423 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CX3CL1P78423 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CX3CL1P78423 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.89□□□□□ -1.63
CX3CL1P78423 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CX3CL1P78423 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CX3CL1P78423 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.88□□□□□ -1.63
CX3CL1P78423 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CX3CL1P78423 AC022164.1-201ENST00000568767 2673 ntBASIC4.88□□□□□ -1.63
CX3CL1P78423 AL137141.1-201ENST00000624622 4836 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms