Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.07□□□□□ -1.6
SRP9P49458 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SRP9P49458 AC007938.2-201ENST00000604666 2634 ntBASIC5.06□□□□□ -1.6
SRP9P49458 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 RNA5SP211-201ENST00000365516 117 ntBASIC5.06□□□□□ -1.6
SRP9P49458 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 RN7SKP279-201ENST00000411383 298 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 AL445928.1-201ENST00000435545 222 ntBASIC5.06□□□□□ -1.6
SRP9P49458 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SRP9P49458 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SRP9P49458 RPS7P3-201ENST00000443360 580 ntBASIC5.06□□□□□ -1.6
SRP9P49458 BMS1P10-201ENST00000443754 1120 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 OR52E7P-201ENST00000452394 933 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 AL122020.1-201ENST00000472287 459 ntBASIC5.06□□□□□ -1.6
SRP9P49458 PFN1P6-201ENST00000476786 399 ntBASIC5.06□□□□□ -1.6
SRP9P49458 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.06□□□□□ -1.6
SRP9P49458 GAPDHP71-201ENST00000511530 1003 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SRP9P49458 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.06□□□□□ -1.6
SRP9P49458 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.06□□□□□ -1.6
SRP9P49458 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.06□□□□□ -1.6
SRP9P49458 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.06□□□□□ -1.6
SRP9P49458 AL138895.2-201ENST00000603019 178 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AC108673.3-201ENST00000609183 335 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.06□□□□□ -1.6
SRP9P49458 MIR6793-201ENST00000612376 63 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AL139099.4-201ENST00000614802 114 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AL122125.1-201ENST00000616999 600 ntBASIC5.06□□□□□ -1.6
SRP9P49458 AL136228.1-201ENST00000622221 319 ntBASIC5.06□□□□□ -1.6
SRP9P49458 GVINP1-202ENST00000531871 7271 ntBASIC5.06□□□□□ -1.6
SRP9P49458 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 AL034546.1-201ENST00000623740 3693 ntBASIC5.06□□□□□ -1.6
SRP9P49458 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.06□□□□□ -1.6
SRP9P49458 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRP9P49458 AC144833.1-201ENST00000567953 4089 ntBASIC5.06□□□□□ -1.6
SRP9P49458 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.05□□□□□ -1.6
SRP9P49458 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SRP9P49458 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 GPS2P1-201ENST00000411761 986 ntBASIC5.05□□□□□ -1.6
SRP9P49458 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.05□□□□□ -1.6
SRP9P49458 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC115283.1-201ENST00000427353 400 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 RNU1-88P-201ENST00000459274 128 ntBASIC5.05□□□□□ -1.6
SRP9P49458 ABCC13-202ENST00000463099 3842 ntBASIC5.05□□□□□ -1.6
SRP9P49458 RPL38P3-201ENST00000484463 213 ntBASIC5.05□□□□□ -1.6
SRP9P49458 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC025458.1-201ENST00000506046 166 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 GAPDHP62-201ENST00000515313 990 ntBASIC5.05□□□□□ -1.6
SRP9P49458 RNA5SP340-201ENST00000517132 107 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.05□□□□□ -1.6
SRP9P49458 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 AL163952.1-202ENST00000569625 600 ntBASIC5.05□□□□□ -1.6
SRP9P49458 MIR4776-2-201ENST00000580204 80 ntBASIC5.05□□□□□ -1.6
SRP9P49458 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.05□□□□□ -1.6
SRP9P49458 AL499605.1-201ENST00000604628 403 ntBASIC5.05□□□□□ -1.6
SRP9P49458 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.05□□□□□ -1.6
SRP9P49458 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.05□□□□□ -1.6
SRP9P49458 AC024884.1-201ENST00000620583 399 ntBASIC5.05□□□□□ -1.6
SRP9P49458 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 AL078621.3-201ENST00000623707 2042 ntBASIC5.05□□□□□ -1.6
SRP9P49458 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
SRP9P49458 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRP9P49458 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.05□□□□□ -1.6
SRP9P49458 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRP9P49458 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 211.7 ms