Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 AC106872.5-201ENST00000508856 1416 ntBASIC5.41□□□□□ -1.54
SOX3P41225 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX3P41225 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX3P41225 EEF1B2P8-201ENST00000414101 671 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AL354766.1-201ENST00000423396 542 ntBASIC5.41□□□□□ -1.54
SOX3P41225 HMGB1P32-201ENST00000425971 565 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.41□□□□□ -1.54
SOX3P41225 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 AC099670.2-201ENST00000435130 321 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX3P41225 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX3P41225 RPL31P15-201ENST00000449770 338 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AL445665.1-202ENST00000452436 324 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC007386.1-201ENST00000455212 582 ntBASIC5.41□□□□□ -1.54
SOX3P41225 SETP20-201ENST00000457046 852 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC108751.3-201ENST00000461814 1020 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AL603882.1-201ENST00000463059 681 ntBASIC5.41□□□□□ -1.54
SOX3P41225 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX3P41225 AC007688.1-201ENST00000475592 759 ntBASIC5.41□□□□□ -1.54
SOX3P41225 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 AC099521.1-201ENST00000482557 334 ntBASIC5.41□□□□□ -1.54
SOX3P41225 CR383656.1-201ENST00000484916 377 ntBASIC5.41□□□□□ -1.54
SOX3P41225 CCNHP1-201ENST00000513311 678 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.41□□□□□ -1.54
SOX3P41225 SNORA70.20-201ENST00000516848 126 ntBASIC5.41□□□□□ -1.54
SOX3P41225 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.41□□□□□ -1.54
SOX3P41225 IGLV3-30-201ENST00000524362 298 ntBASIC5.41□□□□□ -1.54
SOX3P41225 OR8Q1P-201ENST00000526467 655 ntBASIC5.41□□□□□ -1.54
SOX3P41225 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.41□□□□□ -1.54
SOX3P41225 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 AC135626.1-201ENST00000556983 435 ntBASIC5.41□□□□□ -1.54
SOX3P41225 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 AL445670.1-201ENST00000618889 801 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC018628.1-201ENST00000624147 3819 ntBASIC5.41□□□□□ -1.54
SOX3P41225 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
SOX3P41225 AC008691.1-209ENST00000642094 814 ntBASIC5.41□□□□□ -1.54
SOX3P41225 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX3P41225 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SOX3P41225 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SOX3P41225 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SOX3P41225 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 AC015689.2-201ENST00000528172 1738 ntBASIC5.4□□□□□ -1.54
SOX3P41225 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX3P41225 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 AC140479.2-201ENST00000421567 3130 ntBASIC5.4□□□□□ -1.54
SOX3P41225 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.4□□□□□ -1.54
SOX3P41225 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.4□□□□□ -1.54
SOX3P41225 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 NCOA4P2-201ENST00000340589 1813 ntBASIC5.4□□□□□ -1.54
SOX3P41225 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX3P41225 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
SOX3P41225 OR7E101P-201ENST00000400428 513 ntBASIC5.4□□□□□ -1.54
SOX3P41225 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SOX3P41225 RPS3AP2-201ENST00000407190 754 ntBASIC5.4□□□□□ -1.54
SOX3P41225 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.4□□□□□ -1.54
SOX3P41225 RN7SKP29-201ENST00000410957 272 ntBASIC5.4□□□□□ -1.54
SOX3P41225 MRPL53P1-201ENST00000414323 319 ntBASIC5.4□□□□□ -1.54
SOX3P41225 METTL15P3-201ENST00000415522 1221 ntBASIC5.4□□□□□ -1.54
SOX3P41225 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AC104843.2-201ENST00000427666 297 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AK3P5-201ENST00000432033 519 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AC023141.8-201ENST00000442554 208 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AC073072.2-201ENST00000447425 348 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX3P41225 AL157777.1-201ENST00000468100 304 ntBASIC5.4□□□□□ -1.54
SOX3P41225 RPL38P3-201ENST00000484463 213 ntBASIC5.4□□□□□ -1.54
SOX3P41225 AC104109.1-201ENST00000498563 436 ntBASIC5.4□□□□□ -1.54
SOX3P41225 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX3P41225 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.4□□□□□ -1.54
SOX3P41225 MTATP6P1-201ENST00000514057 681 ntBASIC5.4□□□□□ -1.54
SOX3P41225 IGLVIV-64-201ENST00000518581 301 ntBASIC5.4□□□□□ -1.54
SOX3P41225 IGKV3D-34-201ENST00000522638 302 ntBASIC5.4□□□□□ -1.54
SOX3P41225 HMGN2P36-201ENST00000529541 409 ntBASIC5.4□□□□□ -1.54
SOX3P41225 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms