Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RPS26P38-201ENST00000414476 348 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 HMGB1P32-201ENST00000425971 565 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 NAP1L4P3-201ENST00000432820 1147 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC7.22□□□□□ -1.25
COL15A1P39059 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.22□□□□□ -1.25
COL15A1P39059 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
COL15A1P39059 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.22□□□□□ -1.25
COL15A1P39059 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC7.22□□□□□ -1.25
COL15A1P39059 AC016590.3-201ENST00000611171 753 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 AL353684.1-201ENST00000622677 1120 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.22□□□□□ -1.25
COL15A1P39059 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
COL15A1P39059 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.22□□□□□ -1.25
COL15A1P39059 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.22□□□□□ -1.25
COL15A1P39059 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 CPS1-IT1-201ENST00000628368 2306 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.22□□□□□ -1.25
COL15A1P39059 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 AC010329.1-201ENST00000593903 8328 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
COL15A1P39059 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 MIPEPP2-201ENST00000422560 1819 ntBASIC7.22□□□□□ -1.25
COL15A1P39059 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
COL15A1P39059 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL15A1P39059 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.21□□□□□ -1.25
COL15A1P39059 RPS6P23-201ENST00000413224 722 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 MTND2P11-201ENST00000423638 648 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 USP24P1-201ENST00000433802 779 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 OR52B5P-201ENST00000435337 951 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 RPL12P3-201ENST00000440080 396 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 OSTCP1-201ENST00000455507 450 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL15A1P39059 RPS21P4-201ENST00000487122 248 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 RPL15P21-201ENST00000495592 567 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AC072052.1-201ENST00000496556 306 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 RPEP1-201ENST00000504507 658 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
COL15A1P39059 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AP001804.1-201ENST00000526868 919 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC7.21□□□□□ -1.25
COL15A1P39059 AC126177.5-201ENST00000549599 178 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.21□□□□□ -1.25
COL15A1P39059 AC015849.6-201ENST00000605454 474 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 NANOGP3-201ENST00000605855 286 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AL133406.3-201ENST00000606817 541 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AL136370.1-201ENST00000608166 691 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AL133445.2-201ENST00000611191 527 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 AL109620.1-201ENST00000618738 1197 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 OR52B5P-202ENST00000641118 1110 ntBASIC7.21□□□□□ -1.25
COL15A1P39059 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
COL15A1P39059 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
COL15A1P39059 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC7.21□□□□□ -1.25
COL15A1P39059 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
COL15A1P39059 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
COL15A1P39059 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL15A1P39059 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 MFSD8-239ENST00000641590 2479 ntBASIC7.21□□□□□ -1.26
COL15A1P39059 AC137056.2-201ENST00000624055 1958 ntBASIC7.21□□□□□ -1.26
COL15A1P39059 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
COL15A1P39059 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
COL15A1P39059 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 U8.4-201ENST00000363626 134 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 RN7SKP125-201ENST00000410481 302 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.2□□□□□ -1.26
COL15A1P39059 OR6D1P-201ENST00000436165 939 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 BTBD7P2-201ENST00000441962 620 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 RPL7P45-201ENST00000455851 743 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 snoU109.5-201ENST00000516231 132 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
COL15A1P39059 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 AL121612.2-201ENST00000612261 482 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 AC090607.5-201ENST00000615692 224 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
COL15A1P39059 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.2□□□□□ -1.26
COL15A1P39059 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.2□□□□□ -1.26
COL15A1P39059 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
COL15A1P39059 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
COL15A1P39059 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms