Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC079064.1-201ENST00000528365 362 ntBASIC5.67□□□□□ -1.5
RPA3P35244 AC122688.1-201ENST00000541494 223 ntBASIC5.67□□□□□ -1.5
RPA3P35244 AC068305.2-201ENST00000550567 1205 ntBASIC5.67□□□□□ -1.5
RPA3P35244 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.67□□□□□ -1.5
RPA3P35244 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 AC002069.2-201ENST00000603580 883 ntBASIC5.67□□□□□ -1.5
RPA3P35244 MIR6778-201ENST00000617912 73 ntBASIC5.67□□□□□ -1.5
RPA3P35244 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.67□□□□□ -1.5
RPA3P35244 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RPA3P35244 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RPA3P35244 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RPA3P35244 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPA3P35244 OOSP1-201ENST00000398992 1270 ntBASIC5.66□□□□□ -1.5
RPA3P35244 SNORA11.5-201ENST00000408163 128 ntBASIC5.66□□□□□ -1.5
RPA3P35244 AL035660.1-201ENST00000422041 222 ntBASIC5.66□□□□□ -1.5
RPA3P35244 TMEM183AP1-205ENST00000432739 290 ntBASIC5.66□□□□□ -1.5
RPA3P35244 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.66□□□□□ -1.5
RPA3P35244 NDUFA5P5-201ENST00000468361 342 ntBASIC5.66□□□□□ -1.5
RPA3P35244 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.66□□□□□ -1.5
RPA3P35244 RN7SKP253-201ENST00000516424 309 ntBASIC5.66□□□□□ -1.5
RPA3P35244 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 AL356801.1-201ENST00000559320 294 ntBASIC5.66□□□□□ -1.5
RPA3P35244 AC092121.1-201ENST00000569452 202 ntBASIC5.66□□□□□ -1.5
RPA3P35244 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPA3P35244 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RPA3P35244 AC005726.4-201ENST00000582858 458 ntBASIC5.66□□□□□ -1.5
RPA3P35244 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 AL096712.1-201ENST00000614561 159 ntBASIC5.66□□□□□ -1.5
RPA3P35244 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.66□□□□□ -1.5
RPA3P35244 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
RPA3P35244 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RPA3P35244 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RPA3P35244 AC092376.2-201ENST00000622621 4116 ntBASIC5.66□□□□□ -1.5
RPA3P35244 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RPA3P35244 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.66□□□□□ -1.5
RPA3P35244 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.65□□□□□ -1.5
RPA3P35244 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.65□□□□□ -1.5
RPA3P35244 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.65□□□□□ -1.5
RPA3P35244 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
RPA3P35244 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RPA3P35244 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RPA3P35244 MIR1203-201ENST00000408812 85 ntBASIC5.65□□□□□ -1.5
RPA3P35244 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 AC002069.1-201ENST00000429649 1159 ntBASIC5.65□□□□□ -1.5
RPA3P35244 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.65□□□□□ -1.5
RPA3P35244 CBX1P2-201ENST00000453841 458 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.65□□□□□ -1.5
RPA3P35244 TAAR4P-201ENST00000454843 1039 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.65□□□□□ -1.5
RPA3P35244 RPS23P2-201ENST00000463671 415 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AC094085.1-201ENST00000468914 584 ntBASIC5.65□□□□□ -1.5
RPA3P35244 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.65□□□□□ -1.5
RPA3P35244 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.65□□□□□ -1.5
RPA3P35244 AC006499.4-201ENST00000510947 694 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AC139365.2-201ENST00000517972 253 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.65□□□□□ -1.5
RPA3P35244 AL359219.2-201ENST00000555184 348 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AGGF1P7-201ENST00000562369 913 ntBASIC5.65□□□□□ -1.5
RPA3P35244 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPA3P35244 NDUFA5P11-201ENST00000567995 343 ntBASIC5.65□□□□□ -1.5
RPA3P35244 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.65□□□□□ -1.5
RPA3P35244 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RPA3P35244 MIR4660-201ENST00000583549 74 ntBASIC5.65□□□□□ -1.5
RPA3P35244 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.65□□□□□ -1.5
RPA3P35244 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.65□□□□□ -1.5
RPA3P35244 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms