Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 SEPT7P3-201ENST00000455017 621 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN6P29350 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC016687.1-201ENST00000482574 353 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN6P29350 OR8Q1P-201ENST00000526467 655 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 MTND2P17-201ENST00000550281 688 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC091078.2-201ENST00000557145 559 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC067773.1-201ENST00000603284 1094 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC108865.2-201ENST00000606881 432 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC108673.3-201ENST00000609183 335 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 AL136228.1-201ENST00000622221 319 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AL359742.1-201ENST00000622497 540 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTPN6P29350 AC012254.3-201ENST00000591183 2117 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 AC005261.6-201ENST00000623072 1387 ntBASIC5.51□□□□□ -1.53
PTPN6P29350 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPN6P29350 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPN6P29350 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 SYT14P1-202ENST00000600441 1448 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 AC006206.1-201ENST00000544842 3387 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
PTPN6P29350 RNFT1P3-201ENST00000340898 1052 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 RNU1-136P-201ENST00000384181 164 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 RPL11P3-201ENST00000395256 523 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 AC066692.1-201ENST00000421721 457 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 AL355994.1-201ENST00000424379 260 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 EIF5AP4-201ENST00000441206 465 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 CYCSP51-201ENST00000443545 318 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 BMS1P10-201ENST00000443754 1120 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC239798.3-201ENST00000454459 408 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 OR7E157P-201ENST00000494376 911 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 AC090568.1-201ENST00000509499 856 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.5□□□□□ -1.53
PTPN6P29350 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 AC025423.2-201ENST00000537570 439 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 AP005901.4-201ENST00000577336 569 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPN6P29350 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 AC145423.1-201ENST00000605712 336 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AL365181.4-201ENST00000609800 547 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 MIR6809-201ENST00000612189 116 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AL021918.2-201ENST00000613415 194 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC129778.1-202ENST00000623812 261 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AC005618.4-201ENST00000625053 554 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AL591379.1-207ENST00000635982 261 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.5□□□□□ -1.53
PTPN6P29350 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPN6P29350 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPN6P29350 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPN6P29350 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms