Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 AC137695.1-201ENST00000604126 489 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 AL162431.4-201ENST00000604674 411 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 EIF3FP1-201ENST00000613970 806 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRMP28827 HMGB4-204ENST00000522796 2505 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 AL121768.1-201ENST00000613917 2544 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 AC008957.3-201ENST00000624112 2242 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTPRMP28827 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRMP28827 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 PABPC1P8-201ENST00000452851 2086 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 THAP12P9-201ENST00000503971 2360 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
PTPRMP28827 MIR551A-201ENST00000385042 96 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPRMP28827 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRMP28827 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPRMP28827 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRMP28827 CASC22-201ENST00000569713 386 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.13□□□□□ -1.11
PTPRMP28827 AC073575.2-201ENST00000614212 627 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 AC099494.2-201ENST00000623371 978 ntBASIC8.13□□□□□ -1.11
PTPRMP28827 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPRMP28827 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 ODF2L-201ENST00000294678 4267 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPRMP28827 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 OLMALINC-203ENST00000641087 3779 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPRMP28827 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPRMP28827 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPRMP28827 RN7SKP6-201ENST00000364795 319 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPRMP28827 RNU6ATAC34P-201ENST00000408879 121 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 AC007562.1-201ENST00000421819 517 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 AC009480.2-201ENST00000422916 432 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 AC023274.2-201ENST00000445264 521 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 AC044797.1-201ENST00000445744 679 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 ACA64.4-201ENST00000459070 127 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 AC022034.3-201ENST00000471393 478 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC8.12□□□□□ -1.11
PTPRMP28827 PPM1AP1-201ENST00000502740 1135 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 HMGB1P23-201ENST00000518743 568 ntBASIC8.12□□□□□ -1.11
PTPRMP28827 ASB8-204ENST00000536071 568 ntTSL 4 BASIC8.12□□□□□ -1.11
PTPRMP28827 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPRMP28827 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPRMP28827 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
PTPRMP28827 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
PTPRMP28827 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 RAD17P2-201ENST00000451754 1977 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRMP28827 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 RNA5SP332-201ENST00000391063 115 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 AC009127.1-201ENST00000467090 155 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC8.11□□□□□ -1.11
PTPRMP28827 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRMP28827 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 AP002373.2-201ENST00000541631 1060 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 MIR4311-201ENST00000580794 100 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 AC019193.2-201ENST00000610012 634 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 OR52H1-202ENST00000641796 1061 ntBASIC8.11□□□□□ -1.11
PTPRMP28827 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
PTPRMP28827 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.11□□□□□ -1.11
PTPRMP28827 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPRMP28827 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
PTPRMP28827 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC8.1□□□□□ -1.11
PTPRMP28827 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC8.1□□□□□ -1.11
PTPRMP28827 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
PTPRMP28827 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms