Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AL356133.1-201ENST00000444762 372 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AL451074.4-201ENST00000447545 470 ntBASIC7.94□□□□□ -1.14
RFX1P22670 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 KATNBL1P6-201ENST00000453433 915 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RPS7P7-201ENST00000463499 571 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RN7SL741P-201ENST00000482473 289 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RN7SL267P-201ENST00000485107 261 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC021006.1-201ENST00000489849 553 ntBASIC7.94□□□□□ -1.14
RFX1P22670 RN7SL649P-201ENST00000496974 275 ntBASIC7.94□□□□□ -1.14
RFX1P22670 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC7.94□□□□□ -1.14
RFX1P22670 AC113430.1-201ENST00000506872 718 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 CDC42P3-201ENST00000518493 633 ntBASIC7.94□□□□□ -1.14
RFX1P22670 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 HNRNPA1P74-201ENST00000560782 835 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.94□□□□□ -1.14
RFX1P22670 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 RN7SL835P-201ENST00000579920 262 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 AC133041.1-201ENST00000608389 201 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AL391497.1-201ENST00000608671 547 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC108747.1-201ENST00000609508 535 ntBASIC7.94□□□□□ -1.14
RFX1P22670 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AC069209.1-201ENST00000619282 651 ntBASIC7.94□□□□□ -1.14
RFX1P22670 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.94□□□□□ -1.14
RFX1P22670 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
RFX1P22670 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 AC125232.1-201ENST00000452554 1408 ntBASIC7.94□□□□□ -1.14
RFX1P22670 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
RFX1P22670 Z99496.1-201ENST00000469424 1477 ntBASIC7.94□□□□□ -1.14
RFX1P22670 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.94□□□□□ -1.14
RFX1P22670 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 ZNF189-202ENST00000339664 3021 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RFX1P22670 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 AC099535.1-201ENST00000408928 371 ntBASIC7.93□□□□□ -1.14
RFX1P22670 TPMTP3-201ENST00000411928 735 ntBASIC7.93□□□□□ -1.14
RFX1P22670 RPS26P38-201ENST00000414476 348 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC7.93□□□□□ -1.14
RFX1P22670 RPL23AP39-201ENST00000415533 405 ntBASIC7.93□□□□□ -1.14
RFX1P22670 GEMIN2P2-201ENST00000418195 715 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AL359633.1-201ENST00000421403 310 ntBASIC7.93□□□□□ -1.14
RFX1P22670 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 OR2B8P-201ENST00000432841 938 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AL353572.1-201ENST00000442490 417 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RFX1P22670 RBMY2EP-202ENST00000456360 940 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 WBP1LP1-201ENST00000460451 896 ntBASIC7.93□□□□□ -1.14
RFX1P22670 RPL7P48-201ENST00000461513 746 ntBASIC7.93□□□□□ -1.14
RFX1P22670 PGBD4P1-201ENST00000473644 407 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC005017.1-201ENST00000482002 490 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC025271.1-201ENST00000485045 429 ntBASIC7.93□□□□□ -1.14
RFX1P22670 RPL21P42-201ENST00000488408 464 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC113404.1-201ENST00000502589 756 ntTSL 5 BASIC7.93□□□□□ -1.14
RFX1P22670 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
RFX1P22670 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 ATP1B1P1-201ENST00000509767 915 ntBASIC7.93□□□□□ -1.14
RFX1P22670 CYP4F27P-201ENST00000514557 494 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC027801.3-201ENST00000515049 698 ntBASIC7.93□□□□□ -1.14
RFX1P22670 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 SMCO2-203ENST00000535986 1096 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
RFX1P22670 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
RFX1P22670 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.93□□□□□ -1.14
RFX1P22670 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.93□□□□□ -1.14
RFX1P22670 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC7.93□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms