Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.97□□□□□ -1.61
USF1P22415 LRRC37A14P-201ENST00000452297 462 ntBASIC4.97□□□□□ -1.61
USF1P22415 RN7SL352P-201ENST00000466002 277 ntBASIC4.97□□□□□ -1.61
USF1P22415 AC135999.1-201ENST00000478962 479 ntBASIC4.97□□□□□ -1.61
USF1P22415 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.97□□□□□ -1.61
USF1P22415 RN7SL466P-201ENST00000497546 295 ntBASIC4.97□□□□□ -1.61
USF1P22415 AC090058.1-201ENST00000498788 435 ntBASIC4.97□□□□□ -1.61
USF1P22415 NENFP3-201ENST00000503735 313 ntBASIC4.97□□□□□ -1.61
USF1P22415 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 MIR4489-201ENST00000578869 62 ntBASIC4.97□□□□□ -1.61
USF1P22415 RNU4ATAC-201ENST00000580972 127 ntBASIC4.97□□□□□ -1.61
USF1P22415 AC020916.2-201ENST00000591242 360 ntBASIC4.97□□□□□ -1.61
USF1P22415 AP001267.4-201ENST00000602598 545 ntBASIC4.97□□□□□ -1.61
USF1P22415 FO393422.1-201ENST00000603908 708 ntBASIC4.97□□□□□ -1.61
USF1P22415 AC004890.3-201ENST00000605566 1095 ntBASIC4.97□□□□□ -1.61
USF1P22415 AP000864.1-201ENST00000609424 650 ntBASIC4.97□□□□□ -1.61
USF1P22415 SDR42E1P1-201ENST00000611327 477 ntBASIC4.97□□□□□ -1.61
USF1P22415 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.97□□□□□ -1.61
USF1P22415 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 AC012078.1-201ENST00000405035 1646 ntBASIC4.97□□□□□ -1.61
USF1P22415 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC4.97□□□□□ -1.61
USF1P22415 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.97□□□□□ -1.61
USF1P22415 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USF1P22415 AC232271.1-201ENST00000602455 2715 ntBASIC4.96□□□□□ -1.61
USF1P22415 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USF1P22415 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
USF1P22415 AC133552.1-201ENST00000569988 4007 ntBASIC4.96□□□□□ -1.61
USF1P22415 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
USF1P22415 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USF1P22415 AP001284.1-201ENST00000528393 2118 ntBASIC4.96□□□□□ -1.62
USF1P22415 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 AC005261.6-201ENST00000623072 1387 ntBASIC4.96□□□□□ -1.62
USF1P22415 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 RNA5SP46-201ENST00000362370 120 ntBASIC4.96□□□□□ -1.62
USF1P22415 RN7SKP160-201ENST00000363804 340 ntBASIC4.96□□□□□ -1.62
USF1P22415 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USF1P22415 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 BX510359.3-201ENST00000422168 306 ntBASIC4.96□□□□□ -1.62
USF1P22415 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.96□□□□□ -1.62
USF1P22415 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.96□□□□□ -1.62
USF1P22415 RPS26P39-201ENST00000469206 341 ntBASIC4.96□□□□□ -1.62
USF1P22415 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC4.96□□□□□ -1.62
USF1P22415 IGKV2-18-201ENST00000522607 343 ntBASIC4.96□□□□□ -1.62
USF1P22415 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 HMGN2P36-201ENST00000529541 409 ntBASIC4.96□□□□□ -1.62
USF1P22415 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.96□□□□□ -1.62
USF1P22415 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.96□□□□□ -1.62
USF1P22415 IGBP1P1-201ENST00000554337 1009 ntBASIC4.96□□□□□ -1.62
USF1P22415 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.96□□□□□ -1.62
USF1P22415 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 AC104695.2-201ENST00000605056 775 ntBASIC4.96□□□□□ -1.62
USF1P22415 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 AC069234.4-201ENST00000621276 412 ntBASIC4.96□□□□□ -1.62
USF1P22415 AC087565.3-203ENST00000641018 837 ntBASIC4.96□□□□□ -1.62
USF1P22415 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
USF1P22415 ZNF101P1-201ENST00000435701 1720 ntBASIC4.96□□□□□ -1.62
USF1P22415 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
USF1P22415 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.96□□□□□ -1.62
USF1P22415 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
USF1P22415 UGT2B24P-201ENST00000514441 1597 ntBASIC4.95□□□□□ -1.62
USF1P22415 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 AC027279.4-201ENST00000624371 2072 ntBASIC4.95□□□□□ -1.62
USF1P22415 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.95□□□□□ -1.62
USF1P22415 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
USF1P22415 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
USF1P22415 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.95□□□□□ -1.62
USF1P22415 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
USF1P22415 GNG5P2-201ENST00000372054 207 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms