Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 DEFB109A-201ENST00000482450 265 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 MORF4L2P1-201ENST00000503761 858 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 PSMA2P2-201ENST00000504319 686 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AC105420.1-201ENST00000504389 582 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 ST13P12-201ENST00000508958 1094 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 CCNHP1-201ENST00000513311 678 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 SNORD46.2-201ENST00000516021 102 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AP000648.1-201ENST00000529682 397 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 TRAV11-201ENST00000539512 339 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 MTND2P17-201ENST00000550281 688 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AC126615.2-201ENST00000553003 515 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFRAP16234 ZNF322P1-201ENST00000568013 1209 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.06□□□□□ -1.44
PDGFRAP16234 AC060780.2-201ENST00000589047 198 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 COX6CP7-201ENST00000597056 208 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 AL031601.1-201ENST00000605702 394 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 OR8G3P-202ENST00000641572 1255 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.06□□□□□ -1.44
PDGFRAP16234 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PDGFRAP16234 DDX18P6-201ENST00000450119 1997 ntBASIC6.06□□□□□ -1.44
PDGFRAP16234 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PDGFRAP16234 WDR95P-201ENST00000425638 1542 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PDGFRAP16234 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 RNA5SP91-201ENST00000390902 119 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC245060.4-201ENST00000413293 1121 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 VN1R21P-201ENST00000426703 765 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AL512637.1-201ENST00000439523 1231 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFRAP16234 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 MTCYBP14-201ENST00000457471 715 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 PDCL3P4-201ENST00000489621 720 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFRAP16234 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC022826.1-201ENST00000519383 805 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.05□□□□□ -1.44
PDGFRAP16234 HNRNPRP2-201ENST00000528421 743 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 HMGN2P36-201ENST00000529541 409 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 MIR4260-201ENST00000583107 67 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.05□□□□□ -1.44
PDGFRAP16234 AL356752.1-201ENST00000615844 593 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 AP005431.1-201ENST00000618479 319 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 AC243960.7-201ENST00000623532 707 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
PDGFRAP16234 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.05□□□□□ -1.44
PDGFRAP16234 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PDGFRAP16234 CUL4AP1-201ENST00000514750 1863 ntBASIC6.05□□□□□ -1.44
PDGFRAP16234 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.04□□□□□ -1.44
PDGFRAP16234 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AL357752.1-201ENST00000412817 349 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 METTL15P3-201ENST00000415522 1221 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC021876.1-201ENST00000425959 359 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 GAPDHP48-201ENST00000436626 961 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC073072.2-201ENST00000447425 348 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 OR7E116P-201ENST00000448529 957 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 MEMO1P4-201ENST00000453590 386 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.04□□□□□ -1.44
PDGFRAP16234 AC007998.1-201ENST00000474156 672 ntBASIC6.04□□□□□ -1.44
PDGFRAP16234 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PDGFRAP16234 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms