Protein–RNA interactions for Protein: P09016

HOXD4, Homeobox protein Hox-D4, humanhuman

Predicted RBP Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4P09016 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC245060.4-201ENST00000413293 1121 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 Z93019.1-201ENST00000416450 973 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 BX510359.3-201ENST00000422168 306 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.37□□□□□ -1.55
HOXD4P09016 PCBP2P1-201ENST00000437262 977 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 AL512637.1-201ENST00000439523 1231 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD4P09016 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 YWHAEP1-201ENST00000453697 763 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXD4P09016 ATP5LP3-201ENST00000514223 304 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 FTH1P11-201ENST00000517577 551 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD4P09016 AL021368.3-201ENST00000607119 578 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.37□□□□□ -1.55
HOXD4P09016 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD4P09016 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 AC020633.1-201ENST00000468439 2247 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD4P09016 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 PDZK1P1-202ENST00000425209 1350 ntBASIC5.37□□□□□ -1.55
HOXD4P09016 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
HOXD4P09016 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
HOXD4P09016 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.37□□□□□ -1.55
HOXD4P09016 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.37□□□□□ -1.55
HOXD4P09016 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 MAPK10-328ENST00000641553 4009 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 AL157831.2-201ENST00000564681 3095 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HOXD4P09016 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD4P09016 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 AK4P4-201ENST00000419465 646 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 KIF4CP-201ENST00000422742 1279 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD4P09016 BX119321.1-201ENST00000428912 797 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 OR6C71P-201ENST00000432580 913 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 TPTE2P1-204ENST00000435256 593 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AL512593.1-201ENST00000444758 779 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD4P09016 RN7SL269P-201ENST00000467795 305 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AC124945.1-201ENST00000485133 188 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 CYP4F27P-201ENST00000514557 494 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD4P09016 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC138832.1-201ENST00000522871 556 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 OR4A40P-201ENST00000533878 948 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC022404.1-201ENST00000555320 273 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.36□□□□□ -1.55
HOXD4P09016 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC090953.1-201ENST00000604305 1092 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 FAM27E4-201ENST00000605259 342 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD4P09016 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD4P09016 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.36□□□□□ -1.55
HOXD4P09016 NEPNP-201ENST00000404786 1371 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
HOXD4P09016 AC024587.1-201ENST00000505925 2157 ntBASIC5.36□□□□□ -1.55
HOXD4P09016 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HOXD4P09016 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.36□□□□□ -1.55
HOXD4P09016 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
HOXD4P09016 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 AC018809.2-201ENST00000602436 3823 ntBASIC5.35□□□□□ -1.55
HOXD4P09016 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXD4P09016 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
HOXD4P09016 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HOXD4P09016 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXD4P09016 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 SELENOWP1-201ENST00000322792 252 ntBASIC5.35□□□□□ -1.55
HOXD4P09016 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.35□□□□□ -1.55
HOXD4P09016 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXD4P09016 RNA5SP187-201ENST00000384400 119 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms