Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 NDUFB4P8-201ENST00000435351 367 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 BMS1P10-201ENST00000443754 1120 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC092106.1-201ENST00000444291 373 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 EIF3LP3-201ENST00000495197 822 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 BCAS2P1-201ENST00000528022 632 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC139697.1-201ENST00000548429 745 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC007956.1-201ENST00000555623 542 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC134669.1-201ENST00000581275 672 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 MIR4271-201ENST00000582451 67 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 FAM72A-208ENST00000607379 1139 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 MIR6809-201ENST00000612189 116 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC025262.3-201ENST00000623666 360 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC112198.2-201ENST00000426589 6996 ntBASIC5.06□□□□□ -1.6
HLA-DPB1P04440 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DPB1P04440 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 Z95331.1-201ENST00000623075 23112 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AF287957.1-201ENST00000607368 1595 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 TMSB4XP2-201ENST00000335179 210 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 RNU6-673P-201ENST00000365084 104 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 RNU2-18P-201ENST00000411224 162 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 CFL1P4-201ENST00000451536 498 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 NXT1P1-201ENST00000458481 316 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 RPS23P2-201ENST00000463671 415 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 RN7SL188P-201ENST00000469842 285 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 OR51A1P-201ENST00000511110 946 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC021193.1-201ENST00000511607 420 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 OR5H7P-201ENST00000514084 930 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 WBP1LP3-201ENST00000523033 208 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC079064.1-201ENST00000528365 362 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC122688.1-201ENST00000541494 223 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC107958.1-201ENST00000556576 290 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 DHFRP1-201ENST00000579682 559 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC090236.2-201ENST00000587933 1101 ntBASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HLA-DPB1P04440 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms