Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RPS17P5-201ENST00000498293 408 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AC106822.1-201ENST00000502647 526 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.34□□□□□ -1.55
MT-ND1P03886 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.34□□□□□ -1.55
MT-ND1P03886 BCAS2P1-201ENST00000528022 632 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 OR4A43P-201ENST00000532938 908 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 OR4A41P-201ENST00000533053 928 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC092332.1-201ENST00000563684 829 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC011500.1-201ENST00000601963 469 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AC005479.3-201ENST00000602790 431 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 AC145423.1-201ENST00000605712 336 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 uc_338.29-201ENST00000615099 168 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 uc_338.31-201ENST00000615595 186 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 AC021766.1-201ENST00000624404 741 ntBASIC5.34□□□□□ -1.55
MT-ND1P03886 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
MT-ND1P03886 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
MT-ND1P03886 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.34□□□□□ -1.55
MT-ND1P03886 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
MT-ND1P03886 HSPD1P7-201ENST00000447985 1686 ntBASIC5.34□□□□□ -1.56
MT-ND1P03886 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
MT-ND1P03886 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC027279.1-201ENST00000568885 4284 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 RN7SKP250-201ENST00000363924 321 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 KIF4CP-201ENST00000422742 1279 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 GAPDHP48-201ENST00000436626 961 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 BMS1P10-201ENST00000443754 1120 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 RPL5P7-201ENST00000444235 813 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC097463.1-201ENST00000447288 481 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 OR7E116P-201ENST00000448529 957 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC112484.3-201ENST00000505910 329 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AP001960.1-201ENST00000506494 658 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 PRMT5P1-201ENST00000514351 598 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 BTG1P1-201ENST00000540396 508 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC121758.1-202ENST00000556917 658 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AC002519.2-203ENST00000567043 837 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 DHFRP1-201ENST00000579682 559 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 SNORA35B-201ENST00000607417 129 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.33□□□□□ -1.56
MT-ND1P03886 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 AL162574.1-201ENST00000615702 950 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 HTR1DP1-201ENST00000616500 888 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 AC008627.1-201ENST00000517511 1704 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 HSPD1P9-201ENST00000420325 1636 ntBASIC5.33□□□□□ -1.56
MT-ND1P03886 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
MT-ND1P03886 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
MT-ND1P03886 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
MT-ND1P03886 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms