Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AL031985.1-201ENST00000392713 418 ntBASIC5.43□□□□□ -1.54
HCN1O60741 RPS3AP2-201ENST00000407190 754 ntBASIC5.43□□□□□ -1.54
HCN1O60741 EEF1B2P8-201ENST00000414101 671 ntBASIC5.43□□□□□ -1.54
HCN1O60741 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN1O60741 NMD3P2-201ENST00000421815 761 ntBASIC5.43□□□□□ -1.54
HCN1O60741 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN1O60741 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 BMS1P10-201ENST00000443754 1120 ntBASIC5.43□□□□□ -1.54
HCN1O60741 RPL31P15-201ENST00000449770 338 ntBASIC5.43□□□□□ -1.54
HCN1O60741 SDC4P-201ENST00000453285 601 ntBASIC5.43□□□□□ -1.54
HCN1O60741 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN1O60741 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCN1O60741 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN1O60741 PSMA2P2-201ENST00000504319 686 ntBASIC5.43□□□□□ -1.54
HCN1O60741 SNORD46.2-201ENST00000516021 102 ntBASIC5.43□□□□□ -1.54
HCN1O60741 AC022826.1-201ENST00000519383 805 ntBASIC5.43□□□□□ -1.54
HCN1O60741 AP001284.1-201ENST00000528393 2118 ntBASIC5.43□□□□□ -1.54
HCN1O60741 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN1O60741 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.43□□□□□ -1.54
HCN1O60741 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
HCN1O60741 ZNF322P1-201ENST00000568013 1209 ntBASIC5.43□□□□□ -1.54
HCN1O60741 MIR3614-201ENST00000581261 86 ntBASIC5.43□□□□□ -1.54
HCN1O60741 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.43□□□□□ -1.54
HCN1O60741 uc_338.26-201ENST00000612659 160 ntBASIC5.43□□□□□ -1.54
HCN1O60741 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.43□□□□□ -1.54
HCN1O60741 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HCN1O60741 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN1O60741 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCN1O60741 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.43□□□□□ -1.54
HCN1O60741 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCN1O60741 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.42□□□□□ -1.54
HCN1O60741 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN1O60741 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 SNORA17A-201ENST00000391185 133 ntBASIC5.42□□□□□ -1.54
HCN1O60741 CDY17P-201ENST00000414121 1282 ntBASIC5.42□□□□□ -1.54
HCN1O60741 KIF4CP-201ENST00000422742 1279 ntBASIC5.42□□□□□ -1.54
HCN1O60741 NAP1L4P2-201ENST00000425958 899 ntBASIC5.42□□□□□ -1.54
HCN1O60741 MTND6P12-201ENST00000428247 522 ntBASIC5.42□□□□□ -1.54
HCN1O60741 NPM1P18-201ENST00000434232 732 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.42□□□□□ -1.54
HCN1O60741 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 AP006222.1-205ENST00000450734 457 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AL445665.1-202ENST00000452436 324 ntBASIC5.42□□□□□ -1.54
HCN1O60741 RSU1P1-201ENST00000453416 441 ntBASIC5.42□□□□□ -1.54
HCN1O60741 SETP20-201ENST00000457046 852 ntBASIC5.42□□□□□ -1.54
HCN1O60741 RNU7-157P-201ENST00000459600 66 ntBASIC5.42□□□□□ -1.54
HCN1O60741 RN7SL269P-201ENST00000467795 305 ntBASIC5.42□□□□□ -1.54
HCN1O60741 PPIAP19-201ENST00000486414 492 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC104109.1-201ENST00000498563 436 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC112184.1-201ENST00000505179 312 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN1O60741 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.42□□□□□ -1.54
HCN1O60741 AC111000.6-201ENST00000514471 709 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.42□□□□□ -1.54
HCN1O60741 PCNAP4-201ENST00000532690 730 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN1O60741 AL163952.1-202ENST00000569625 600 ntBASIC5.42□□□□□ -1.54
HCN1O60741 AC027243.2-201ENST00000602530 724 ntBASIC5.42□□□□□ -1.54
HCN1O60741 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN1O60741 AC127024.6-201ENST00000621598 424 ntBASIC5.42□□□□□ -1.54
HCN1O60741 SNORA17.5-201ENST00000630429 132 ntBASIC5.42□□□□□ -1.54
HCN1O60741 MIR4302-201ENST00000638058 60 ntBASIC5.42□□□□□ -1.54
HCN1O60741 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.42□□□□□ -1.54
HCN1O60741 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 KARSP1-201ENST00000451871 1752 ntBASIC5.42□□□□□ -1.54
HCN1O60741 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HCN1O60741 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HCN1O60741 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.42□□□□□ -1.54
HCN1O60741 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HCN1O60741 AL158152.1-201ENST00000602652 1435 ntBASIC5.41□□□□□ -1.54
HCN1O60741 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HCN1O60741 AC119674.1-202ENST00000641333 1860 ntBASIC5.41□□□□□ -1.54
HCN1O60741 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HCN1O60741 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HCN1O60741 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HCN1O60741 RNU1-150P-201ENST00000362491 162 ntBASIC5.41□□□□□ -1.54
HCN1O60741 RN7SKP78-201ENST00000364711 318 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms