Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.12□□□□□ -1.43
O00370 AC084754.1-201ENST00000463466 464 ntBASIC6.12□□□□□ -1.43
O00370 AC009120.1-201ENST00000493458 473 ntBASIC6.12□□□□□ -1.43
O00370 NENFP3-201ENST00000503735 313 ntBASIC6.12□□□□□ -1.43
O00370 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.12□□□□□ -1.43
O00370 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.12□□□□□ -1.43
O00370 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
O00370 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.12□□□□□ -1.43
O00370 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 AP004609.2-201ENST00000532177 190 ntBASIC6.12□□□□□ -1.43
O00370 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.12□□□□□ -1.43
O00370 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 AC096996.1-201ENST00000563813 325 ntBASIC6.12□□□□□ -1.43
O00370 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.12□□□□□ -1.43
O00370 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.12□□□□□ -1.43
O00370 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.12□□□□□ -1.43
O00370 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.12□□□□□ -1.43
O00370 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.12□□□□□ -1.43
O00370 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 AL513327.3-201ENST00000602618 469 ntBASIC6.12□□□□□ -1.43
O00370 AC100767.2-201ENST00000604840 693 ntBASIC6.12□□□□□ -1.43
O00370 AL022394.1-201ENST00000606979 292 ntBASIC6.12□□□□□ -1.43
O00370 AL133481.2-203ENST00000607558 139 ntBASIC6.12□□□□□ -1.43
O00370 AC091305.2-201ENST00000624049 1576 ntBASIC6.12□□□□□ -1.43
O00370 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
O00370 AC138627.1-204ENST00000641894 765 ntBASIC6.12□□□□□ -1.43
O00370 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
O00370 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.12□□□□□ -1.43
O00370 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
O00370 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.12□□□□□ -1.43
O00370 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 AC016745.2-201ENST00000608834 3443 ntBASIC6.12□□□□□ -1.43
O00370 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
O00370 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
O00370 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.11□□□□□ -1.43
O00370 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.11□□□□□ -1.43
O00370 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
O00370 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
O00370 AL159987.1-201ENST00000347911 293 ntBASIC6.11□□□□□ -1.43
O00370 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
O00370 RN7SKP279-201ENST00000411383 298 ntBASIC6.11□□□□□ -1.43
O00370 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.11□□□□□ -1.43
O00370 METTL15P3-201ENST00000415522 1221 ntBASIC6.11□□□□□ -1.43
O00370 RPS3P2-201ENST00000421346 701 ntBASIC6.11□□□□□ -1.43
O00370 AC127526.2-201ENST00000426436 775 ntBASIC6.11□□□□□ -1.43
O00370 BX119904.3-201ENST00000428194 957 ntBASIC6.11□□□□□ -1.43
O00370 KCTD9P1-201ENST00000430462 1167 ntBASIC6.11□□□□□ -1.43
O00370 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.11□□□□□ -1.43
O00370 NPM1P18-201ENST00000434232 732 ntBASIC6.11□□□□□ -1.43
O00370 NPM1P48-201ENST00000436002 853 ntBASIC6.11□□□□□ -1.43
O00370 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.11□□□□□ -1.43
O00370 MTND6P5-201ENST00000448266 512 ntBASIC6.11□□□□□ -1.43
O00370 OR7E116P-201ENST00000448529 957 ntBASIC6.11□□□□□ -1.43
O00370 RPSAP37-201ENST00000470913 821 ntBASIC6.11□□□□□ -1.43
O00370 UBFD1P1-201ENST00000473259 814 ntBASIC6.11□□□□□ -1.43
O00370 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.11□□□□□ -1.43
O00370 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.11□□□□□ -1.43
O00370 SNORA70.20-201ENST00000516848 126 ntBASIC6.11□□□□□ -1.43
O00370 IGKV2-4-201ENST00000523070 340 ntBASIC6.11□□□□□ -1.43
O00370 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.11□□□□□ -1.43
O00370 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.11□□□□□ -1.43
O00370 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.11□□□□□ -1.43
O00370 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.11□□□□□ -1.43
O00370 MIR4260-201ENST00000583107 67 ntBASIC6.11□□□□□ -1.43
O00370 AC015802.2-201ENST00000589690 189 ntBASIC6.11□□□□□ -1.43
O00370 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
O00370 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.11□□□□□ -1.43
O00370 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
O00370 AL161912.4-201ENST00000623889 2468 ntBASIC6.1□□□□□ -1.43
O00370 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
O00370 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.1□□□□□ -1.43
O00370 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
O00370 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.1□□□□□ -1.43
O00370 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
O00370 AC023490.2-201ENST00000359859 470 ntBASIC6.1□□□□□ -1.43
O00370 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.1□□□□□ -1.43
O00370 SNORA5.1-201ENST00000384275 131 ntBASIC6.1□□□□□ -1.43
O00370 MIR130A-201ENST00000385274 89 ntBASIC6.1□□□□□ -1.43
O00370 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.1□□□□□ -1.43
O00370 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.1□□□□□ -1.43
O00370 NIFKP3-201ENST00000417799 865 ntBASIC6.1□□□□□ -1.43
O00370 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms