Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.4□□□□□ -1.39
DDX39AO00148 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.39□□□□□ -1.39
DDX39AO00148 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.39□□□□□ -1.39
DDX39AO00148 OFD1P17-201ENST00000437639 3018 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 PWAR1-201ENST00000624188 2414 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 RNA5SP131-201ENST00000365452 119 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 RNA5SP30-201ENST00000365552 115 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 RN7SKP293-201ENST00000411389 296 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.39□□□□□ -1.39
DDX39AO00148 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.39□□□□□ -1.39
DDX39AO00148 AL133173.1-201ENST00000423458 397 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AC113412.1-201ENST00000425840 504 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 CRIP1P1-201ENST00000427567 185 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 RPL34P27-201ENST00000428810 349 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AC012075.1-201ENST00000436549 580 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AL390119.1-201ENST00000440329 312 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 RPL12P39-201ENST00000455456 496 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AC104849.1-201ENST00000462623 405 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 RPS3AP15-201ENST00000483874 781 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 RN7SL466P-201ENST00000497546 295 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.39□□□□□ -1.39
DDX39AO00148 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.39□□□□□ -1.39
DDX39AO00148 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.39□□□□□ -1.39
DDX39AO00148 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.39□□□□□ -1.39
DDX39AO00148 MRPS21P7-201ENST00000566937 238 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.39□□□□□ -1.39
DDX39AO00148 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 AL133481.2-203ENST00000607558 139 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AL354950.1-201ENST00000614150 568 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 CU639417.4-201ENST00000623928 207 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.39□□□□□ -1.39
DDX39AO00148 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 AC140479.2-201ENST00000421567 3130 ntBASIC6.39□□□□□ -1.39
DDX39AO00148 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.39□□□□□ -1.39
DDX39AO00148 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.39□□□□□ -1.39
DDX39AO00148 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
DDX39AO00148 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
DDX39AO00148 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
DDX39AO00148 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.38□□□□□ -1.39
DDX39AO00148 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.38□□□□□ -1.39
DDX39AO00148 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 AC006335.2-201ENST00000437993 330 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.38□□□□□ -1.39
DDX39AO00148 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 RSU1P1-201ENST00000453416 441 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 MEMO1P4-201ENST00000453590 386 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 EIF3LP3-201ENST00000495197 822 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.38□□□□□ -1.39
DDX39AO00148 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 DUTP7-201ENST00000507982 486 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 snoU109.5-201ENST00000516231 132 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.38□□□□□ -1.39
DDX39AO00148 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 AL121594.2-201ENST00000541658 472 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 RBM22P12-201ENST00000567098 1255 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 MIR1273E-201ENST00000581165 102 ntBASIC6.38□□□□□ -1.39
DDX39AO00148 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.38□□□□□ -1.39
DDX39AO00148 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.38□□□□□ -1.39
DDX39AO00148 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
DDX39AO00148 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.38□□□□□ -1.39
DDX39AO00148 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
DDX39AO00148 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
DDX39AO00148 AC104964.3-201ENST00000606115 2860 ntBASIC6.37□□□□□ -1.39
DDX39AO00148 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.37□□□□□ -1.39
DDX39AO00148 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.37□□□□□ -1.39
DDX39AO00148 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
DDX39AO00148 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms