Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 RPL7AP69-201ENST00000595306 806 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AL390877.1-201ENST00000605704 214 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC244100.4-201ENST00000617747 388 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC099654.6-201ENST00000636487 512 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC004817.4-201ENST00000602396 3625 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 AC092111.2-201ENST00000611627 1414 ntBASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RBFOX3A6NFN3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RNU6-673P-201ENST00000365084 104 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RN7SKP97-201ENST00000410966 333 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 DHFRP2-201ENST00000414224 547 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 PTPN2P1-201ENST00000423212 1072 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AL034379.1-201ENST00000423216 253 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RPS7P3-201ENST00000443360 580 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC016772.1-201ENST00000444170 1261 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 ZNF619P1-201ENST00000446539 752 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AL157385.1-201ENST00000446973 268 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 NXT1P1-201ENST00000458481 316 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC114982.2-201ENST00000461396 358 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AP000797.2-201ENST00000475768 606 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RPL5P33-201ENST00000487833 905 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 EIF3KP3-201ENST00000514461 639 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RNA5SP434-201ENST00000516647 121 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 KCTD9P6-201ENST00000522306 950 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC021269.1-201ENST00000526860 705 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC006349.1-201ENST00000555526 235 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 GARSP1-201ENST00000570895 719 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 OR8G7P-201ENST00000616658 848 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AL512356.3-201ENST00000623005 461 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC007603.3-201ENST00000636915 979 ntBASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.45□□□□□ -1.7
RBFOX3A6NFN3 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RBFOX3A6NFN3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms