Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 MTCO1P22-201ENST00000604619 1360 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 HMGB1P20-201ENST00000402555 677 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC127526.2-201ENST00000426436 775 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 USP24P1-201ENST00000433802 779 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC002504.1-201ENST00000438281 691 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 RPL23AP60-201ENST00000450011 454 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC119501.1-201ENST00000603646 475 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AC004890.3-201ENST00000605566 1095 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 AL118508.4-201ENST00000624142 1176 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 MTCO1P1-201ENST00000624263 1081 ntBASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
HDAC6Q9UBN7 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 RNA5SP394-201ENST00000364216 119 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL121977.1-201ENST00000401636 979 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 MIR1178-201ENST00000408396 91 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 RN7SKP278-201ENST00000410504 342 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL590399.2-201ENST00000427536 309 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL445928.1-201ENST00000435545 222 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 BTBD7P2-201ENST00000441962 620 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 RPS7P3-201ENST00000443360 580 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 NENFP3-201ENST00000503735 313 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 IGKV2-19-201ENST00000518132 283 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 HMGN2P36-201ENST00000529541 409 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AP003168.1-201ENST00000530091 307 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL049874.4-201ENST00000557593 255 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC067805.1-201ENST00000559344 470 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 MIR4443-201ENST00000585052 53 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC119403.2-201ENST00000590960 598 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 MIR132-201ENST00000591554 101 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AP001267.4-201ENST00000602598 545 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC104695.2-201ENST00000605056 775 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 BNIP3P7-201ENST00000605641 516 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL391597.1-201ENST00000618707 694 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AL353684.1-201ENST00000622677 1120 ntBASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
HDAC6Q9UBN7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.6□□□□□ -1.35
HDAC6Q9UBN7 SNORA64.1-201ENST00000362600 132 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms