Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RPL12P16-201ENST00000431098 498 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC242426.1-201ENST00000435270 960 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC002504.1-201ENST00000438281 691 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL603882.1-201ENST00000463059 681 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 PFN1P6-201ENST00000476786 399 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC009120.1-201ENST00000493458 473 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 RNU6-319P-201ENST00000516025 108 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 MIR2117-201ENST00000516780 80 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 SNORA81.2-201ENST00000516868 170 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC139365.2-201ENST00000517972 253 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC027667.1-201ENST00000545814 304 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL139022.2-201ENST00000606934 443 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL355974.3-201ENST00000617383 467 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 AC087565.3-203ENST00000641018 837 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 MFSD8-219ENST00000641228 2559 ntBASIC6.65□□□□□ -1.34
COL20A1Q9P218 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.65□□□□□ -1.34
COL20A1Q9P218 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COL20A1Q9P218 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 CR382285.2-201ENST00000624662 1495 ntBASIC6.65□□□□□ -1.35
COL20A1Q9P218 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL20A1Q9P218 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL20A1Q9P218 AC110716.2-201ENST00000563865 3945 ntBASIC6.65□□□□□ -1.35
COL20A1Q9P218 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COL20A1Q9P218 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COL20A1Q9P218 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.65□□□□□ -1.35
COL20A1Q9P218 ZNF101P1-201ENST00000435701 1720 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 AL669831.5-218ENST00000591702 1873 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 RN7SKP293-201ENST00000411389 296 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 SDHDP6-201ENST00000414693 480 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 RAB9AP4-201ENST00000415230 609 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC073508.1-201ENST00000428866 656 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 RAB9AP5-201ENST00000437794 597 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 RAB9AP2-201ENST00000443911 597 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 SUMO2P1-206ENST00000445436 284 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 EEF1B2P6-201ENST00000445713 673 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 RPS26P39-201ENST00000469206 341 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 RPL32P33-201ENST00000487023 394 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 CAB39P1-201ENST00000502277 460 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC074087.1-201ENST00000512059 724 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 SNORA43.3-201ENST00000517240 103 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC027176.2-201ENST00000559166 746 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC104695.2-201ENST00000605056 775 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 AC022467.1-201ENST00000614738 749 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 MRE11P1-201ENST00000464884 2127 ntBASIC6.64□□□□□ -1.35
COL20A1Q9P218 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COL20A1Q9P218 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COL20A1Q9P218 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 ZNF658B-201ENST00000602828 3408 ntBASIC6.63□□□□□ -1.35
COL20A1Q9P218 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
COL20A1Q9P218 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COL20A1Q9P218 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms