Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 OOSP1P2-201ENST00000579644 351 ntBASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 AC005034.4-201ENST00000603612 899 ntBASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 AC084782.3-201ENST00000612282 578 ntBASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 MIR6806-201ENST00000622141 64 ntBASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 OR5AC4P-202ENST00000642086 985 ntBASIC5.9□□□□□ -1.46
AMBRA1Q9C0C7 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 AC087516.1-201ENST00000561236 2428 ntBASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 FBXL21-201ENST00000297158 1305 ntBASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 AC005261.6-201ENST00000623072 1387 ntBASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
AMBRA1Q9C0C7 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 GUCY1B2-204ENST00000531898 1979 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RNFT1P3-201ENST00000340898 1052 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RNA5SP435-201ENST00000364044 108 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-468P-201ENST00000384003 109 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 U3.52-201ENST00000384034 216 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 SNORA79B-201ENST00000410557 148 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 FO393414.1-201ENST00000428697 1184 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 SOCS5P1-201ENST00000440415 949 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 EEF1B2P3-201ENST00000447718 678 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 TPT1P1-201ENST00000458495 518 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC104849.1-201ENST00000462623 405 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC115223.1-201ENST00000466377 870 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC135999.1-201ENST00000478962 479 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RN7SL170P-201ENST00000487098 295 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RN7SL568P-201ENST00000493069 298 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 RNU6-1334P-201ENST00000516032 105 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC008429.4-201ENST00000521201 182 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 BUD31P1-201ENST00000521828 359 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC005519.1-201ENST00000554490 601 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC026956.1-201ENST00000558741 396 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 MIR3154-201ENST00000577829 84 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AP001357.1-201ENST00000586304 1053 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 GLYATL1P2-202ENST00000588046 902 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 DUXAP3-201ENST00000603616 594 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC093783.1-201ENST00000612976 329 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 MIR6503-201ENST00000622884 86 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC005514.1-201ENST00000623521 208 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC019080.5-201ENST00000624891 757 ntBASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.89□□□□□ -1.47
AMBRA1Q9C0C7 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms