Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC091059.2-201ENST00000623355 614 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 AC073488.3-201ENST00000631611 778 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 OR11H2-202ENST00000641517 1085 ntBASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC28BQ9BUN5 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 RNA5SP326-201ENST00000363209 110 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC016739.1-201ENST00000405359 345 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC211486.3-201ENST00000412694 621 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 MEAF6P1-201ENST00000416092 327 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC234771.2-201ENST00000445718 597 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 OR52E3P-201ENST00000452083 936 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 RBMY2HP-201ENST00000457961 720 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 H3F3AP5-201ENST00000475267 429 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 NPM1P29-201ENST00000483112 803 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 DUTP1-201ENST00000493631 470 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC074255.1-201ENST00000511259 501 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 MAST4-IT1-201ENST00000514241 658 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 MIR3157-201ENST00000578688 85 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC139792.1-201ENST00000607051 647 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 U91328.4-201ENST00000608919 517 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 MIR6829-201ENST00000620375 67 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AL512356.3-201ENST00000623005 461 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 ABCC13-202ENST00000463099 3842 ntBASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC28BQ9BUN5 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 ADAM5-202ENST00000399789 1942 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 SNORA64.3-201ENST00000365647 134 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 MIR130A-201ENST00000385274 89 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 OR6C64P-201ENST00000419708 825 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC092646.1-201ENST00000427142 901 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 EIF5AP4-201ENST00000441206 465 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AL359839.1-201ENST00000451975 1160 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 PPIAP7-201ENST00000454070 489 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 RPL36AP55-201ENST00000454114 305 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 RPS7P10-201ENST00000464254 603 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC021660.1-201ENST00000465006 554 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC099521.1-201ENST00000482557 334 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 RN7SL346P-201ENST00000491561 294 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 MTCO3P42-201ENST00000509488 518 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 MTCO3P39-201ENST00000514812 518 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AP000620.1-201ENST00000527147 504 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC079064.1-201ENST00000528365 362 ntBASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC28BQ9BUN5 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms