Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC068305.2-201ENST00000550567 1205 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC006530.1-201ENST00000555980 571 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC005726.4-201ENST00000582858 458 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 FAM27E4-201ENST00000605259 342 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AC108865.2-201ENST00000606881 432 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL096712.1-201ENST00000614561 159 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 MIR6778-201ENST00000617912 73 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 OR11H2-202ENST00000641517 1085 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 AL442128.2-201ENST00000620246 1824 ntBASIC5.41□□□□□ -1.54
COL21A1Q96P44 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
COL21A1Q96P44 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.41□□□□□ -1.54
COL21A1Q96P44 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
COL21A1Q96P44 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL21A1Q96P44 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC004158.1-201ENST00000564508 4319 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL21A1Q96P44 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL21A1Q96P44 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
COL21A1Q96P44 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 RN7SKP269-201ENST00000365545 319 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 MIR1203-201ENST00000408812 85 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 HLA-DPA3-207ENST00000454398 229 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC094085.1-201ENST00000468914 584 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC105384.2-201ENST00000508433 640 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC114781.3-201ENST00000512083 142 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 RNA5SP271-201ENST00000516700 88 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AP000648.1-201ENST00000529682 397 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 NDUFA5P11-201ENST00000567995 343 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC019322.1-201ENST00000571869 389 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 HIRAP1-201ENST00000605318 787 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AL031601.1-201ENST00000605702 394 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC007786.3-201ENST00000615154 596 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.4□□□□□ -1.54
COL21A1Q96P44 MIR1910-201ENST00000636955 80 ntBASIC5.4□□□□□ -1.54
COL21A1Q96P44 AC010266.2-201ENST00000564741 3255 ntBASIC5.4□□□□□ -1.55
COL21A1Q96P44 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL21A1Q96P44 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL21A1Q96P44 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
COL21A1Q96P44 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.4□□□□□ -1.55
COL21A1Q96P44 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
COL21A1Q96P44 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL21A1Q96P44 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
COL21A1Q96P44 AC015689.2-201ENST00000528172 1738 ntBASIC5.4□□□□□ -1.55
COL21A1Q96P44 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
COL21A1Q96P44 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AL137058.3-201ENST00000624531 3099 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 OR7E25P-201ENST00000344844 931 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC023490.2-201ENST00000359859 470 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 RN7SKP81-201ENST00000365603 331 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 VN1R21P-201ENST00000426703 765 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
COL21A1Q96P44 PCBP2P1-201ENST00000437262 977 ntBASIC5.39□□□□□ -1.55
COL21A1Q96P44 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.39□□□□□ -1.55
COL21A1Q96P44 RPL12P11-201ENST00000439970 501 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms