Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC023512.1-201ENST00000444513 499 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AL845321.1-201ENST00000444603 348 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 GAPDHP16-201ENST00000448152 962 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 GOT2P2-201ENST00000450663 1251 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC008885.2-201ENST00000509506 930 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 MTCYBP44-201ENST00000514835 823 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AP000619.2-201ENST00000546014 969 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 BLZF2P-201ENST00000553776 1130 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CYP2C60P-201ENST00000566088 139 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 MIR744-201ENST00000578242 98 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 VN1R82P-201ENST00000601481 356 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AF131215.7-201ENST00000602443 707 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 BUB1P1-201ENST00000603541 607 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC018618.2-201ENST00000604770 446 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 PDCD6IPP1-202ENST00000622242 1064 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC005832.2-201ENST00000538921 1430 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 MTND5P24-201ENST00000438892 1767 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 AC009220.2-201ENST00000489759 1751 ntBASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.49□□□□□ -1.37
PTCHD1Q96NR3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC010329.1-201ENST00000593903 8328 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC104837.1-201ENST00000444644 1587 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 MAPK10-365ENST00000641902 3825 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC092725.2-201ENST00000567658 1389 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 RNA5SP27-201ENST00000363839 119 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 MIR199B-201ENST00000384849 110 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 HMGB3P31-201ENST00000413333 595 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 RPLP1P10-201ENST00000413972 339 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AL672212.1-201ENST00000422246 400 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 RPL3P11-201ENST00000434028 1146 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 MTCYBP3-201ENST00000445588 1137 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 CTSLP6-201ENST00000458273 1002 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 RN7SL390P-201ENST00000470634 284 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 RPL30P6-201ENST00000475925 342 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC068724.1-201ENST00000487100 792 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC010460.1-201ENST00000507087 466 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 PPIAP6-201ENST00000557078 499 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 MIR4312-201ENST00000579909 76 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 OR2BH1P-201ENST00000608850 864 ntBASIC6.48□□□□□ -1.37
PTCHD1Q96NR3 AC004223.4-201ENST00000612426 332 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms