Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC009303.3-201ENST00000591103 736 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 FAM27E4-201ENST00000605259 342 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC004890.3-201ENST00000605566 1095 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 BX322635.1-201ENST00000605804 496 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 AP000720.1-201ENST00000625091 483 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 AC000095.2-202ENST00000637415 154 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF4Q92544 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM9SF4Q92544 NLRP3P1-201ENST00000622303 1785 ntBASIC5.59□□□□□ -1.51
TM9SF4Q92544 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.59□□□□□ -1.52
TM9SF4Q92544 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
TM9SF4Q92544 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
TM9SF4Q92544 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
TM9SF4Q92544 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.59□□□□□ -1.52
TM9SF4Q92544 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM9SF4Q92544 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 MIR375-201ENST00000362103 64 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 RNA5SP242-201ENST00000364171 118 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AL096829.1-201ENST00000413677 457 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 RPL34P3-201ENST00000421454 338 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 SETP9-201ENST00000423837 832 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 BX119321.1-201ENST00000428912 797 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC064862.4-201ENST00000442180 334 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 RPL36AP39-201ENST00000445859 318 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 ZNF619P1-201ENST00000446539 752 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 MTND2P3-201ENST00000452458 470 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 RPSAP39-201ENST00000467439 883 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC023245.1-201ENST00000468501 517 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 RPS4XP14-201ENST00000493072 781 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 CYCSP22-201ENST00000517555 339 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 PCNAP4-201ENST00000532690 730 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC073575.2-201ENST00000614212 627 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC096861.1-201ENST00000616652 240 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 GTF2IP4-201ENST00000453092 2054 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 AL161912.4-201ENST00000623889 2468 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 RNF19BPY-201ENST00000458209 1550 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AC232271.1-201ENST00000602455 2715 ntBASIC5.58□□□□□ -1.52
TM9SF4Q92544 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM9SF4Q92544 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.58□□□□□ -1.52
TM9SF4Q92544 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF4Q92544 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF4Q92544 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF4Q92544 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TM9SF4Q92544 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms