Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC4.78□□□□□ -1.64
CCDC71LQ8N9Z2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.65
CCDC71LQ8N9Z2 OR4F13P-202ENST00000560066 2054 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AL121886.1-201ENST00000358609 435 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RNF10P1-201ENST00000418589 369 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 DEFA9P-201ENST00000433042 285 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RPS12P17-201ENST00000438591 377 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AL590004.3-202ENST00000445883 451 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RPS18P1-201ENST00000447840 458 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RPS23P2-201ENST00000463671 415 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC092865.4-201ENST00000477936 615 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 TRBV8-1-201ENST00000481590 279 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 ATP5LP5-201ENST00000483050 299 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RPS17P5-201ENST00000498293 408 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC114324.2-202ENST00000503812 134 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 OSTC-204ENST00000512478 663 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 SNORA74.1-201ENST00000516320 180 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RNA5SP75-201ENST00000516841 111 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC137627.1-201ENST00000545761 289 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC005632.2-201ENST00000564271 828 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MIR7853-201ENST00000584820 132 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RPSAP75-201ENST00000605848 301 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC068726.1-201ENST00000610993 341 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RBPJP7-201ENST00000442803 1447 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 RBPJP5-201ENST00000449433 1447 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC027228.2-201ENST00000567141 2154 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 AC018717.1-201ENST00000457712 1505 ntBASIC4.77□□□□□ -1.65
CCDC71LQ8N9Z2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AL080312.1-201ENST00000256654 824 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 RNU4-44P-201ENST00000363050 141 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 RNA5SP77-201ENST00000365394 120 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 OOSP1-201ENST00000398992 1270 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 RPL5P25-201ENST00000441148 775 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 AL589765.3-201ENST00000446084 462 ntBASIC4.76□□□□□ -1.65
CCDC71LQ8N9Z2 RPL7AP10-201ENST00000481016 791 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms