Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AL359715.3-201ENST00000569267 2123 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 OR4K12P-201ENST00000406538 961 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 GTF3AP1-201ENST00000416942 1004 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 RPL7P56-201ENST00000429441 717 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 CNOT7P2-201ENST00000441051 832 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 IGBP1P3-201ENST00000447449 1000 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 RPL7P45-201ENST00000455851 743 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 RN7SL188P-201ENST00000469842 285 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 RPL10P14-201ENST00000565265 298 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AP005403.1-201ENST00000579720 229 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC090527.3-201ENST00000619041 548 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AL359955.1-201ENST00000455242 3275 ntBASIC8.6□□□□□ -1.03
VPS8Q8N3P4 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.6□□□□□ -1.03
VPS8Q8N3P4 AC100757.1-201ENST00000616872 1835 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AC138907.8-201ENST00000623981 2256 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 RN7SKP185-201ENST00000362813 326 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AC245047.2-201ENST00000441060 530 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 RN7SL629P-201ENST00000489622 285 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 RN7SL447P-201ENST00000494711 245 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 SEPT10P1-201ENST00000517342 1162 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 OR4A17P-201ENST00000526032 904 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AC093388.1-201ENST00000609166 430 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AL590763.1-201ENST00000398297 1545 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS8Q8N3P4 AC016745.2-201ENST00000608834 3443 ntBASIC8.59□□□□□ -1.03
VPS8Q8N3P4 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 MIR1178-201ENST00000408396 91 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 RNA5SP487-201ENST00000410186 122 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC110749.1-201ENST00000462007 357 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC006499.3-201ENST00000506077 748 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 RN7SL356P-201ENST00000582228 248 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC000095.2-202ENST00000637415 154 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 ABCA11P-202ENST00000504019 2110 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 AC010168.2-201ENST00000562691 5428 ntBASIC8.58□□□□□ -1.04
VPS8Q8N3P4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
VPS8Q8N3P4 RARSP1-201ENST00000542842 1418 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 NANOGP4-201ENST00000427230 913 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AC099670.2-201ENST00000435130 321 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 GAPDHP25-201ENST00000447061 1001 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 PGAM1P13-201ENST00000507497 754 ntBASIC8.57□□□□□ -1.04
VPS8Q8N3P4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC8.57□□□□□ -1.04
VPS8Q8N3P4 RNU6-941P-201ENST00000516346 108 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms