Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 AC016687.1-201ENST00000482574 353 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC096754.1-201ENST00000508904 818 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 MTND3P12-201ENST00000559068 328 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC092868.3-201ENST00000560515 784 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 MIR4509-3-201ENST00000578671 94 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 MIR4509-2-201ENST00000583920 94 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 MTCO2P2-201ENST00000591258 225 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 FO393422.1-201ENST00000603908 708 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC022106.1-201ENST00000612834 766 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC024255.1-201ENST00000614376 102 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 MIR4509-1-201ENST00000618224 94 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC084824.4-201ENST00000620106 731 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC068057.2-201ENST00000624047 895 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AC027279.4-201ENST00000624371 2072 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 AL157831.2-201ENST00000564681 3095 ntBASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
OTOP1Q7RTM1 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC112243.1-201ENST00000623949 3851 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNA5SP333-201ENST00000363466 118 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNA5SP334-201ENST00000364825 118 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNA5SP156-201ENST00000410250 110 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 GTF2IP5-201ENST00000414608 731 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 TRBV26OR9-2-201ENST00000432077 293 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC020898.1-201ENST00000474167 787 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RN7SL423P-201ENST00000486202 304 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC108693.1-201ENST00000496068 432 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 WBP1LP3-201ENST00000523033 208 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 OR56A7P-201ENST00000524865 941 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 KCTD9P4-201ENST00000526766 1166 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC010547.7-201ENST00000570323 333 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNU6-1192P-201ENST00000612197 107 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC009464.1-201ENST00000615731 469 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 RNU6-489P-201ENST00000618289 107 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC007275.1-201ENST00000621243 671 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 AC006213.6-201ENST00000623722 4179 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 PABPC1P8-201ENST00000452851 2086 ntBASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
OTOP1Q7RTM1 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms