Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 XIST-201ENST00000416330 750 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 RPA2P2-201ENST00000419698 796 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7□□□□□ -1.29
PCDH1Q08174 RNGTTP1-201ENST00000420965 728 ntBASIC7□□□□□ -1.29
PCDH1Q08174 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 AC073900.1-201ENST00000429766 776 ntBASIC7□□□□□ -1.29
PCDH1Q08174 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 ARAFP2-201ENST00000440565 559 ntBASIC7□□□□□ -1.29
PCDH1Q08174 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 AC005002.1-201ENST00000447458 540 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC003071.1-201ENST00000451219 789 ntBASIC7□□□□□ -1.29
PCDH1Q08174 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 SEPT7P3-201ENST00000455017 621 ntBASIC7□□□□□ -1.29
PCDH1Q08174 RN7SL228P-201ENST00000470060 303 ntBASIC7□□□□□ -1.29
PCDH1Q08174 RN7SL152P-201ENST00000484176 298 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC7□□□□□ -1.29
PCDH1Q08174 RNU6-718P-201ENST00000516166 105 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 AC124293.1-201ENST00000530034 493 ntBASIC7□□□□□ -1.29
PCDH1Q08174 OR6C7P-201ENST00000547875 934 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AL049780.1-201ENST00000554430 489 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 NPM1P47-201ENST00000560843 856 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7□□□□□ -1.29
PCDH1Q08174 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 RPS7P1-201ENST00000571702 585 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC7□□□□□ -1.29
PCDH1Q08174 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 AC010463.3-201ENST00000594077 500 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC7□□□□□ -1.29
PCDH1Q08174 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 AC090970.3-201ENST00000612566 866 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AL356321.1-201ENST00000621360 228 ntBASIC7□□□□□ -1.29
PCDH1Q08174 AL450226.2-201ENST00000622913 439 ntBASIC7□□□□□ -1.29
PCDH1Q08174 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7□□□□□ -1.29
PCDH1Q08174 AC025048.6-202ENST00000627667 438 ntBASIC7□□□□□ -1.29
PCDH1Q08174 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 AC241377.2-202ENST00000636462 997 ntBASIC7□□□□□ -1.29
PCDH1Q08174 ENSA-215ENST00000638926 360 ntTSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 AC099063.3-201ENST00000642066 185 ntBASIC7□□□□□ -1.29
PCDH1Q08174 TMC3-AS1-206ENST00000612811 2726 ntBASIC7□□□□□ -1.29
PCDH1Q08174 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
PCDH1Q08174 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7□□□□□ -1.29
PCDH1Q08174 EEF1A1P28-201ENST00000450915 1403 ntBASIC7□□□□□ -1.29
PCDH1Q08174 FOLH1B-202ENST00000529567 2145 ntBASIC7□□□□□ -1.29
PCDH1Q08174 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
PCDH1Q08174 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
PCDH1Q08174 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC090771.1-201ENST00000585803 1618 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 SNORA73B-201ENST00000363217 204 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 RNA5SP396-201ENST00000364834 120 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 RNA5SP427-201ENST00000365323 119 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 ARMCX7P-201ENST00000372828 562 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC007068.1-201ENST00000396690 844 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 AC245052.5-201ENST00000416320 649 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDH1Q08174 GSTA6P-201ENST00000424144 582 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.99□□□□□ -1.29
PCDH1Q08174 GAS5-211ENST00000432536 959 ntTSL 2 BASIC6.99□□□□□ -1.29
PCDH1Q08174 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 RPS21P1-201ENST00000434479 247 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 SNRPEP8-201ENST00000442866 260 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL139135.2-201ENST00000445040 433 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 NPM1P9-201ENST00000453156 844 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.99□□□□□ -1.29
PCDH1Q08174 RN7SL91P-201ENST00000469313 291 ntBASIC6.99□□□□□ -1.29
PCDH1Q08174 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
PCDH1Q08174 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms