Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 OR4F13P-202ENST00000560066 2054 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC144833.1-201ENST00000567953 4089 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC109446.4-201ENST00000623235 2755 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC007938.2-201ENST00000604666 2634 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 MED28P3-201ENST00000444288 531 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC023271.1-201ENST00000445936 1090 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC009963.4-201ENST00000448535 339 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 ABCC13-202ENST00000463099 3842 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 RN7SL197P-201ENST00000466981 299 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC117394.1-201ENST00000477323 567 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 RN7SKP253-201ENST00000516424 309 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 IGLV3-24-201ENST00000517477 197 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 COX6CP7-201ENST00000597056 208 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC007842.1-201ENST00000597336 2039 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 AC009962.1-201ENST00000567327 3813 ntBASIC5.43□□□□□ -1.54
HMGCS1Q01581 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGCS1Q01581 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGCS1Q01581 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL132656.3-201ENST00000606384 1595 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AP000432.2-201ENST00000624164 2048 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 RN7SKP145-201ENST00000363291 303 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 SNORA70.6-201ENST00000383934 134 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 SEPT7P2-202ENST00000398921 823 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 MIR1203-201ENST00000408812 85 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC002069.1-201ENST00000429649 1159 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 RPS10P18-201ENST00000442662 495 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 ACA64.1-201ENST00000459171 127 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 SNORD125-201ENST00000459538 96 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 DUTP7-201ENST00000507982 486 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC093815.1-201ENST00000508637 280 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC097486.1-201ENST00000515331 210 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC122688.1-201ENST00000541494 223 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC090888.3-201ENST00000558917 509 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AC023389.2-201ENST00000580031 955 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL096712.1-201ENST00000614561 159 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL031658.2-201ENST00000616850 651 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 MIR6133-201ENST00000617057 108 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL359742.1-201ENST00000622497 540 ntBASIC5.42□□□□□ -1.54
HMGCS1Q01581 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
HMGCS1Q01581 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms