Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 BX284613.1-201ENST00000452221 1641 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 SEMA5A-201ENST00000382496 11762 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 HSPD1P12-201ENST00000429127 1069 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC084824.1-201ENST00000550917 1005 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC024941.1-201ENST00000612250 334 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
HSPG2P98160 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 SNORA71.3-201ENST00000362582 128 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AL049697.2-201ENST00000403708 294 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AL009179.1-201ENST00000406085 265 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 CASKP1-201ENST00000412870 582 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 EI24P4-201ENST00000423683 1078 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 TXNP5-201ENST00000441043 315 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 SLC25A14P1-201ENST00000502867 901 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC3.31□□□□□ -1.88
HSPG2P98160 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 CYCSP1-201ENST00000604815 315 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 AC010928.1-201ENST00000592477 1447 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC3.31□□□□□ -1.88
HSPG2P98160 AC011933.2-201ENST00000578539 2790 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
HSPG2P98160 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 AC007996.1-201ENST00000620414 2821 ntBASIC3.31□□□□□ -1.88
HSPG2P98160 PCM1-212ENST00000519253 6443 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
HSPG2P98160 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HSPG2P98160 AC016251.2-201ENST00000623393 3089 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AL121886.1-201ENST00000358609 435 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 ATG4AP1-201ENST00000416893 538 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 TMEM183AP1-205ENST00000432739 290 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC083829.1-201ENST00000503756 657 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 SAP18P1-201ENST00000512058 390 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 MXRA5-201ENST00000217939 9793 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 MT-RNR2-201ENST00000387347 1559 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HSPG2P98160 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HSPG2P98160 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.3□□□□□ -1.88
HSPG2P98160 AL358232.1-201ENST00000448030 501 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC3.3□□□□□ -1.88
HSPG2P98160 RN7SKP288-201ENST00000516227 268 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AP001880.2-201ENST00000538233 448 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 YWHABP2-201ENST00000540201 713 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.3□□□□□ -1.88
HSPG2P98160 AC005341.1-201ENST00000571086 708 ntBASIC3.3□□□□□ -1.88
HSPG2P98160 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms